| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1876 |
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| Symbol | |
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| ID | 5192152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2148608 |
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| End bp | 2149333 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640586340 |
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| Product | oligogalacturonate-specific porin |
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| Protein accession | YP_001267208 |
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| Protein GI | 148547106 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.176231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATCA CACTTCGCCG CCTCATCGCC GCCAGTACGC TCGGCCTGTC GTTCTACGCC
TGCGCAGACT CCGCCAGCAT CAACTACCGG CACACGTTCA CCGAAGATGA CAGCATTCAT
TCCGACCGGA TAAAGCTGAG TTACCGCAAG GACAGCGGCC TGGGGTTTGC CGCAGAAATC
AAATACAAGA CTGCCGGCGA CCGCGAAGAC GTCGCCTACG ACAACATGGT CAACAACGGC
CATGAGTTCA CCGTGGACTA CAACTACAAG ATGAGCCCCC GGTCGACCTG GACCCCCGCC
TTCCAGATGG ACAGCACCAA GGATGCGACC ACCTACAAGT TCGGCTTGAA GTACAACTAC
AAGCTCAGCG ACACCTGGTA CGTCGCCACC CGCGTGCGCC ACGACGCACG CAACCTCGAC
CGCGACCAGA TTGACCACAG CAAGCCGGAC CGCGCCAAGG ACAACCAGAA CACCACCCGC
CTTGAAGGCT GGCTCGGCTA TACCCCCAGC GGCCCGTGGG CATTCGAATA CCAGTACATC
CACTTCACCA CCGACTACAT CCGCTACGAC AACAAGAAGC GCGACTACGA GCAGAACCTG
ATCATCAAGT ACAAGCTCAA CAAACAGTGG GCACCGTTCA TGGAGGTGGG CGACATCAAG
GTCAACAGTT ACACGGACGA TCGCCAGGCC CGTTGGCGCC TGGGTATCCA GTACAACTTC
CTGTAA
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| Protein sequence | MNITLRRLIA ASTLGLSFYA CADSASINYR HTFTEDDSIH SDRIKLSYRK DSGLGFAAEI
KYKTAGDRED VAYDNMVNNG HEFTVDYNYK MSPRSTWTPA FQMDSTKDAT TYKFGLKYNY
KLSDTWYVAT RVRHDARNLD RDQIDHSKPD RAKDNQNTTR LEGWLGYTPS GPWAFEYQYI
HFTTDYIRYD NKKRDYEQNL IIKYKLNKQW APFMEVGDIK VNSYTDDRQA RWRLGIQYNF
L
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