Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1720 |
Symbol | |
ID | 5191445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1971485 |
End bp | 1972915 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586190 |
Product | MltD domain-containing protein |
Protein accession | YP_001267060 |
Protein GI | 148546958 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.131331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCC GTAGCCGCAG AACCTCTCAT TCCGTCGCCC TGACGCGCCT GGCCCAAATC AGTGCGCTGG CCCTGGCCGC CACCTTGGTG GGCTGCCAGA GCACCCGTCA GCTCGACGAA TCCGATAGCG TTCGCGCGCA CAACTACCAG GCGCGGATCA AGCACAAGCC TTCTCCGCTG CTGGTCAAGC CGGCCGAGCA GGCGCCGCAG GATGTCTGGG AGCGCATGCG CCAGGGCTTC GCCCTGCAGG ACAGCATCGA CGTCAACCCG CGCATCGAAC AGCAGCGCTT GTGGTTCGCC AGCAACCCGA CCTTCATCGA AAGCGCCGGG GAACGTGGCA GCCTCTACCT GCACTACATC GTCGAGCGCC TTGAAGAACG CGACATGCCG CTGGAACTGG CCCTGCTGCC AGCCATCGAA AGTGCCTACA ACCCCATGGC CTACTCACGC GCCAGCGCTG CCGGCATGTG GCAGTTCATG CCGGCTACCG GTCGCCACTT CAACCTGCGC CAGACCAACT TCTATGACGG CCGCCGCGAT GTCACCGCGT CGACCAACGC CGCGCTGGAC TACCTGACCC GCCTGCACGA CATGTTCAAC GGCGACTGGC TGTTGGCCCT GGCGGCCTAC AATGCCGGCG AAGGCACCGT CAGCCGAGCC ATCGAGCGCA ACGAAAGGCT CGGCCTGCCG ACCGACTACT GGAACCTGCC GCTACCACAG GAAACCCGCG ACTACGTACC CAAGTTGCTG GCACTGTCGC AGGTGGTGTC CACGCCAGAA GCCTATGGTG TCAATCTCAC CCCGATCGCC AACGAACCGT ACTTCGAAGC GGTGGCGATC AATGATCGCC TGGACCTTAC CCGGGTCGCG GCCTTTGCCA ACATCGACGA GGACGAGCTG ATCCAGCTCA ACCCGGCATT CAAGAAGCGC ATGACCGTCG ATGGCCCGAA ACAGCTGCTG GTGCCCACCG CCAAGGCGCA GTTGCTCAGT GCCAGCCTGT CCAACCTCAA CCCGGAGCAA CTGGTCAGCC TGCAACCGCC GAAAGCAGCG TTTGCCCGGG CTGTGGCCGA AGCCAAGGCA CCGGTGGGGG CGCGTAGCTA CCGGGTCAAG CGTGGCGATA ACCTAAGCGC CATCGCCAAG GTCAACCGTG TGTCGGTCAA GGACATCAAG CGCTGGAACC GTTTGTCCGG CAACAGTCTG CGTGCTGGCC AGGTTCTGGC CCTGCGCGGT GGCAGTGCAC CGAGCGCCGC CGGCAACCGG GTTGCCGCCT CCGGGAAGCG CTCCACGCAA TACAAGGTCC GCAAGGGCGA TTCCCTGTAC CTGGTGGCCA AGCGCTTCAA TGTGGAAATG AAGCACCTCA AGCGCTGGAA CCCACGCAGC GGCCATGCCC TCAAGCCAGG CCAGACCCTG ACCGTCTACC TCGGGCATTG A
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Protein sequence | MSSRSRRTSH SVALTRLAQI SALALAATLV GCQSTRQLDE SDSVRAHNYQ ARIKHKPSPL LVKPAEQAPQ DVWERMRQGF ALQDSIDVNP RIEQQRLWFA SNPTFIESAG ERGSLYLHYI VERLEERDMP LELALLPAIE SAYNPMAYSR ASAAGMWQFM PATGRHFNLR QTNFYDGRRD VTASTNAALD YLTRLHDMFN GDWLLALAAY NAGEGTVSRA IERNERLGLP TDYWNLPLPQ ETRDYVPKLL ALSQVVSTPE AYGVNLTPIA NEPYFEAVAI NDRLDLTRVA AFANIDEDEL IQLNPAFKKR MTVDGPKQLL VPTAKAQLLS ASLSNLNPEQ LVSLQPPKAA FARAVAEAKA PVGARSYRVK RGDNLSAIAK VNRVSVKDIK RWNRLSGNSL RAGQVLALRG GSAPSAAGNR VAASGKRSTQ YKVRKGDSLY LVAKRFNVEM KHLKRWNPRS GHALKPGQTL TVYLGH
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