Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1692 |
Symbol | |
ID | 5194605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1934791 |
End bp | 1935813 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640586162 |
Product | amidohydrolase 2 |
Protein accession | YP_001267032 |
Protein GI | 148546930 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.104214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGAAGA TGACCATGAC CGCCAGAGCG CTGGCTTGTG TGCTGTTGTT CGGCTGGCTG TGCCAGGCGG CCCAGGCGCG CGAGTACCGC TACAGTGATG CCCACTTGCA CTACGTGGAC TTCTTCCAGG AAAGTGAAGG CATGCCGGCG CTGATCAAGG CCATGGATGC CGCAGGGGTT GAGCAGTCGA TGATTTCAGG CATACCCGTG GCCAAGAAAT GGCACGAAGA CGAGCCCAAG CGCCCGCGCT ACTACGCCGG TGATGATGCC GACGCCTATT GGTACAGCGC CACCGACACT TACGTGGCGG CGGCGCTGCA GCAATTGCCA AGTGAGCAGC GCAAGCGGTT CCACCCGTTC CTAAGTGGTT TCAACCCGGT GGACAAGAAT GCTGTCAGCC ATATCGAGCG CATGCTCGAT TTGTACCCGG GGCTGTGGCA GGGCATCGGC GAGGTGTTCA CCCGACATGA TGACCTGACA GCGCTGACCA GTGGCGACAC GCCACGTGCC AATAATGAAG CCATGACGCG TATCTACCAC CTGGCGGCCG AGCGCGACCT GCCCGTGCTG CTGCATTCCA ACATCACCTC CAAGCGCGAG CGCAACCCGC TCTACCTGGC GGAGATCGAA GAGCCGCTGC GCAACCATCC GCATACGCGA TTCATCTGGG CGCATGCGGG CAGCAGCATG GAGATACATC GCCATCAGAC GCAGATGGAC TTTCTACTGC CGGTACTGAC GCGATTGCTG GAGGACTACC CGAACCTGTA TGTCGATTTG TCGTGGAGTG TGCTGCAGCC GTATTTGCTG GATGAGCAGG GCGTGCCGCG CAAGGCATGG CTGACGCTGG TCGAGAAGTA CCCGGAGCGA TTCATGCTGG GGTCGGATGT GGTGGGGCGG TTCGGCAGCC TGGGGGAACA GATGCACGGG TTCAAGCCGT TTCTGGATGC CTTGCCGGAG GCGGTGGCGC ACAAGGTGGC CCGGGAGAAT TTTCTGGCGG TGTTGCCCAA GGTACAGCAG TGA
|
Protein sequence | MRKMTMTARA LACVLLFGWL CQAAQAREYR YSDAHLHYVD FFQESEGMPA LIKAMDAAGV EQSMISGIPV AKKWHEDEPK RPRYYAGDDA DAYWYSATDT YVAAALQQLP SEQRKRFHPF LSGFNPVDKN AVSHIERMLD LYPGLWQGIG EVFTRHDDLT ALTSGDTPRA NNEAMTRIYH LAAERDLPVL LHSNITSKRE RNPLYLAEIE EPLRNHPHTR FIWAHAGSSM EIHRHQTQMD FLLPVLTRLL EDYPNLYVDL SWSVLQPYLL DEQGVPRKAW LTLVEKYPER FMLGSDVVGR FGSLGEQMHG FKPFLDALPE AVAHKVAREN FLAVLPKVQQ
|
| |