| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1683 |
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| Symbol | |
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| ID | 5195453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1924614 |
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| End bp | 1926053 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586153 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001267023 |
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| Protein GI | 148546921 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCC CAACGTTGAT CAAACCCTTG CCCCTGCTCG GCGCCTGCCT GCTGCTGAGC
GCCTGCGCCA CCCCTGCACT GCCGCCGCAA CACGGCGTGC CTGCCCCGGC CCGCTGGCAG
GCAGCCACGC CCGAGGCGCC ACCCCGCAAC TTGACCGGCT GGTGGCAGTC GTTCGGCAGC
CCGACACTGA ACCAGCTGGT GGAGCAAGCC CGCACCGACA GCTTCGAAGT CGGTGCGGCC
ATGGCCCGGG TTCGCCAGGC GCAGGCCGAT GCGGTCATTG CCGGCGGCCC CTTGCTGCCT
GAAGTGACCG GGGCAGCCAA CGCCAACCGC GAGCGCCTGC AGCACGGCGA CGGCTACAGC
CAGCTGAATT CCAGCCCGAC CCAGCGCACC ACTCATTACC TGGATGTGGC CCTGAAGGCC
AGCTACGAGG TGGACTTCTG GGGCGGCAAC GCGGCAGCGC GCGAAAGTGC CCTGCACAAC
CTGCAAGCCA GTGAGTTCGA CCGCGCGACC GTTGAACTGA CCTTGCTCGG CAAGGTTGCC
GACAGCTACA TGCAGGCGCT GGCCTTCCAG CAGCAGGGGC GGATTGCCGA CCTTAACCTG
GCCAATGCCG AGCGTGTCCT GCAACTGGTG CAAACCCGCT TCGATGCAGG CTCGGCCACG
GCACTGGAAT TGGCCCAGCA ACAAAGCCTG GTCGCCGCCC AGCAACGGCA ACGCCCGCTG
TACCAACAAC AGGCCCGGGA AGCCCTGATC ACCCTGGCGA CCCTGGTCGG GCAGCCGGTG
CAGGACCTGC AACTGGGCAA CACGCGCTTT GAACAGCTCA ACTGGCCCTC GATCGATGCG
GGCCTGCCCA GCGAACTGAT CAGCCGACGG CCGGATATCG CCAATGCCGA GGCCAAGCTG
GCGGCGGCTC AGGCCAATGT GCGTGTAGCC CGCGCGGCGA TGCTGCCCAA ACTCAACCTG
ACGCTGATCG TCGGCAGCGG CGCCGATCAT TTCCCGGACG TCTTGCGCAA CCCCTTCACC
AGCCTCGCCG CAGGCTTGGT TACCCCGGTG TTCGACAACG GCCGACTGGG CGCCGAGCGC
GACAAAGCGG TGGCAGCCCA GGACGAACTC TTGCAGGACT ACCGCGGCGC CATCCTGGCC
GGTTTCAGCG ATGTGGAAAA GGCCCTCAAT ACCCTGGACG GCATCGACCG GCAACTGCAT
TGGCAGGCGA TCGAACTGCA ACAGGCGCGC AAAGCCTTCG ACATTGCCGA AAGCCGCTAC
CAGGCGGGCG CCGAGGACCT GCTGACCGTC CTGCAGACCC AACGCACCCT GTACCAGGCT
CAGGACGAGG ATGTGCAACT GCGCCTCAAG CGGGTCATGG GCAGCATCGC CCTGTACAAG
GCCCTGGGCG GCGGCTGGCA GGTCGCTGGC GCTGAACCGG GTGCCGCACC TGGCGCTTAA
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| Protein sequence | MSTPTLIKPL PLLGACLLLS ACATPALPPQ HGVPAPARWQ AATPEAPPRN LTGWWQSFGS
PTLNQLVEQA RTDSFEVGAA MARVRQAQAD AVIAGGPLLP EVTGAANANR ERLQHGDGYS
QLNSSPTQRT THYLDVALKA SYEVDFWGGN AAARESALHN LQASEFDRAT VELTLLGKVA
DSYMQALAFQ QQGRIADLNL ANAERVLQLV QTRFDAGSAT ALELAQQQSL VAAQQRQRPL
YQQQAREALI TLATLVGQPV QDLQLGNTRF EQLNWPSIDA GLPSELISRR PDIANAEAKL
AAAQANVRVA RAAMLPKLNL TLIVGSGADH FPDVLRNPFT SLAAGLVTPV FDNGRLGAER
DKAVAAQDEL LQDYRGAILA GFSDVEKALN TLDGIDRQLH WQAIELQQAR KAFDIAESRY
QAGAEDLLTV LQTQRTLYQA QDEDVQLRLK RVMGSIALYK ALGGGWQVAG AEPGAAPGA
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