| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1677 |
|---|
| Symbol | |
|---|
| ID | 5193762 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1910471 |
|---|
| End bp | 1913647 |
|---|
| Gene Length | 3177 bp |
|---|
| Protein Length | 1058 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640586147 |
|---|
| Product | amino acid adenylation domain-containing protein |
|---|
| Protein accession | YP_001267017 |
|---|
| Protein GI | 148546915 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
|---|
| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGTT ACGTAGACCA GGCCGAGGAC ATCGGTTTTG CCCTGACCGT CGACCAGCAA
CACTGGCTCG ATGCCTTGCC CGCTTGCCCG GACTGGTCAC AGGCCGCGAC GCTGCTGAAG
ATCAGCGTTC AGGGCCGGCC GGACCCGGCG CGCCTGAGCC AGGCGCTTGA GCGCTTGGTC
GAGCGCCACC CGATATTGGC CGGGCGCCTG GGCACTGCCC CGGGATACCG CGGCATGCGC
CAGTTCATCG GCGCCCGGCG GCCAGCCCTG ACGCTGGCAG TGCAGGCCGA GGCAGGTGCG
CCGGCACTGC TCGAGCCTTG GTTGCAGCAG CGCTTCGAAA TCGACCAGCT GCCAGCCGCC
CAGGCCTTGC TGGTACCGGC CGCCGATGCC GGGCAATGGC ATCTATGGCT GGGGGTGGCG
GGCTTTGCCT GCGACGCGGC TGGCATGGCC ATGCTGTACC GTGACCTGGC GGCGTTGTAT
GACACGCCAG CCGTGCCGGA TGAAGACCTG CCTGAAGCCT TCGGGCAGTA TCTGGAGTGG
CGTGCCGAAG TGGCCCAGGA TGAGGATGCA GCGGCAGCCC GTGGCTACTG GCAAGGGCAC
CTGATGCCAA CGGAGCAGGG CATGAGCGCG CCTTGGCCAG CCTATCGCCA GGACCAACCA
GCGACGCATC AGGCACACCA TCAGGTGAAT CTGCCGCTGG CCTTGCAGGG GCAGTTGCAA
CGCCTGGCCG ACGCCCGTCA GGCCAGCCTG GACACGCTGC TGCAGGCGGC CTGGTGGGCC
TTGCTGGGCC GGCTTGGCGA CAGCAACCGG TTGTTGGGCG CCTGGCAGCA CGATGCGCGA
CAGGATTATG ACTACTTCGC GAACAGTGCG GGGTCGTTCA GCAAGTTATT GCCGTTGTGC
CTGCAGTGGG CTGACGAAAC CCGTTTCGGC GAGCACCTTG CAGCGCTCGG CGCCGCGCTG
GAGCAGCATG TGGCGTGGCA GGAGTACTGG GTACCGGAAT GGGTGCCCAC AGCCGTGCCG
ACCGTGGCGT TTTCCACTAC GCCGGCGCTC GCGCCGCAGG TTGCCGGCGG ACTGTGCTGG
CAGGGCGAGC TACTGGCGCC ACGCCTGCCG GCGGGCATCG AGCTGCAGCT GCGCATTTGC
CCAGCAGCGG GTGCTGACCA ACCGATTACC GTGAGCCTGG ATTACCTGGC CGGGCGCTAC
AGTGCGCGCG GCATGCAAGG CCTGCTGGAG CAGTACATTG AATTGCTGCG CAGCATCGTC
CAGGCGCCGG ACCGCCCGCT GCGGCAGTTG AACCTGCTGG GTGAAGCCGA GCGCCAGCGC
CTGCTGTCGA TCAACCCCGC GCCGCAACCA CTGGCCGCGA CATCACTGGC GGCCCAGATC
AGCCAGTGGG CAATCGACAC CCCCGACGCG CTGGCGCTGG TCGCAGGTGA CGCGGGCCTG
AGTTACGCCC AACTGGAGTT GGCAGTGCAG CGCCTGGCGC TGGCGCTGCA GCAGGCTGGC
GTGCAACCCG GGGCGGTGCT GGCACTGGCG CTGCCGCGTT CGCTGGACTG GGTCGTGGCG
ATGTTGGCCA GTTGGCGTGT CGGCGCAGCC TACCTGGCGC TGGAGCCGCA CTGGCCCGTT
GCCCGGCAGG TGCGCCTGAT GACACAGGCG GGGGCCACGC AGGTGCTGGT CGAACCGGCA
GCGGTGGCCA GCCTGCGTGA GCAGGGCATA GCGGCGCTGA GCCTTGACAG CCTGTACCCG
CTGGCGGTTG ACACTGCACC GCTGCAACCG CATGCAGCCA GCGCCAGCGA TGCCGCCTAT
GTCCTGTTCA CCTCGGGCTC GACAGGCACC CCAAAAGGGG TGGTGATCGA GCACCGGCAC
CTGCTGAACT ACACCGCAGG CGTGTGCCAC ACGCTGGCGC TGGAGGGCTG TCGTCACTTC
GCATTCGGCT CGACGGTGTC GGCCGACCTT GGCCATACCA CGCTGTTCGC AGCCTTGTAT
GTGGGTGCGA CACTGCACGT GGCCGCCGAC GAGGTGATGA AGGATGCTGA ACTGTTTGCT
GCGTACCTCG AGCAGCAGGC AATCGACTGC CTGAAGATCG TACCGTCGCA CCTGAGCGCG
CTGCTGGAGT CGAAGGCACC GGCAGTACCG GCCACCGTCA TCCTGGGGGG GGAAGCCCCG
AGCGCGGCGT TGCTGCAGCG CCTGTTGCAG ATACGTCCGG ACTGCAAGCT GTTCAACCAT
TACGGCCCGA CCGAAACCAC GGTCGGGGTC ATGGTGCACC CGGTTCGGGC GGTACCGACC
GGCACCCTCG GGTTGTCGCA GGTGTTGCCC AACAACCAGG TCTATGTGCT GGATCAGCAC
TTGCAGTTGG CGGTCACCGG CGTGCTGGGC GAACTGTATG TCGGTGGGCA GCAGGTGTGT
CGCGGCTACC TGCAAGACGT GCAAAGTGAC CCGCCGGCGT TCGTCGAGAG CCCGTTCGTG
GCGGGCGAGC GGCTTTACCG CACCGGCGAC CTGGCCCGCT ATCGCCCGGA CGGTGCTATC
GAGCTGCAAG GCCGGCGCGA CCATCAGGTG AAGATACGCG GCTTCCGCAT CGAGCTGGCG
GAGATCGAGG CACAGCTGTC GGGTGCACCG CAGGTGGTCG AGGCGGCGGT GTTGTGTGAT
GGAGAAGCGC TGAGCGCGTA TGTCAGCTTG CGCGACGAGG CCACGGCGGC TGCCCTGGAC
GCGGTCCGCG AGTACCTTGC ACGGCAACTG CCGGCGGTGA TGCTGCCGCG CACCCTGCAG
GCATTGCCGC GGTTGCCGCG CCTGGGCAAC GGCAAGCTCG ACCGGCAAGC GTTGCGGCAG
GTGGGCAAGG AACCTGCGGC GGGTCTGCTG GCCCCGCGTG ATGCACTGGA AACCGTGATT
GCGCAGCGCA TGGCGCAACT GCTGGGGCTG GAGCAAGTGG GCATCGAGCA GGACTTTTTT
GCACTGGGCG GGCATTCGCT GCTGGTCATC AAGCTGGCGG CAGGTATTCG CAAGTTGCTG
CAGTGCGACA TCAATCCAGG CGTCATCTTC GACCACGCTA CGGTTGCCAC CCTTGCCCAG
GCGCTGCGCG AGCGCGAAGC CAACCCTGGC CAGTTGCTCA AGCTGGCCCA GGCCCGTCTG
CGGCTCGACA GCATGAGCCC TGAAGAAAAA GCCCGGCTGC TGGAAAAGAG CCGCTGA
|
|---|
| Protein sequence | MNGYVDQAED IGFALTVDQQ HWLDALPACP DWSQAATLLK ISVQGRPDPA RLSQALERLV
ERHPILAGRL GTAPGYRGMR QFIGARRPAL TLAVQAEAGA PALLEPWLQQ RFEIDQLPAA
QALLVPAADA GQWHLWLGVA GFACDAAGMA MLYRDLAALY DTPAVPDEDL PEAFGQYLEW
RAEVAQDEDA AAARGYWQGH LMPTEQGMSA PWPAYRQDQP ATHQAHHQVN LPLALQGQLQ
RLADARQASL DTLLQAAWWA LLGRLGDSNR LLGAWQHDAR QDYDYFANSA GSFSKLLPLC
LQWADETRFG EHLAALGAAL EQHVAWQEYW VPEWVPTAVP TVAFSTTPAL APQVAGGLCW
QGELLAPRLP AGIELQLRIC PAAGADQPIT VSLDYLAGRY SARGMQGLLE QYIELLRSIV
QAPDRPLRQL NLLGEAERQR LLSINPAPQP LAATSLAAQI SQWAIDTPDA LALVAGDAGL
SYAQLELAVQ RLALALQQAG VQPGAVLALA LPRSLDWVVA MLASWRVGAA YLALEPHWPV
ARQVRLMTQA GATQVLVEPA AVASLREQGI AALSLDSLYP LAVDTAPLQP HAASASDAAY
VLFTSGSTGT PKGVVIEHRH LLNYTAGVCH TLALEGCRHF AFGSTVSADL GHTTLFAALY
VGATLHVAAD EVMKDAELFA AYLEQQAIDC LKIVPSHLSA LLESKAPAVP ATVILGGEAP
SAALLQRLLQ IRPDCKLFNH YGPTETTVGV MVHPVRAVPT GTLGLSQVLP NNQVYVLDQH
LQLAVTGVLG ELYVGGQQVC RGYLQDVQSD PPAFVESPFV AGERLYRTGD LARYRPDGAI
ELQGRRDHQV KIRGFRIELA EIEAQLSGAP QVVEAAVLCD GEALSAYVSL RDEATAAALD
AVREYLARQL PAVMLPRTLQ ALPRLPRLGN GKLDRQALRQ VGKEPAAGLL APRDALETVI
AQRMAQLLGL EQVGIEQDFF ALGGHSLLVI KLAAGIRKLL QCDINPGVIF DHATVATLAQ
ALREREANPG QLLKLAQARL RLDSMSPEEK ARLLEKSR
|
|---|
| |