Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1655 |
Symbol | |
ID | 5194757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1859327 |
End bp | 1860139 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586125 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001266995 |
Protein GI | 148546893 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGTC GTACGCCTTT GGCTGCACTG GCATTGTTGG CGCTGACGGC AGGTTTGCAA GGTTGCGCCA GCCAGCGCAG CAGTGCCGCG CTGGATGAGG CCACCGTTGC CTTCCAGGGG GTCAAAGATG ATTCCGATGT GCTGCGCAGC GCGCCGCGTG ACGTGATTCG GGCGGGTGAA TCGCTGGCTC GCGCCGAGCG CCTGTCCAGT TACATCGGCA CCGGTTCTGA TGTGCGGCAT TATGCTTACC TCAGCCAGCG CTACAGCGAG ATTGCCCGCG AGCATGCCAA GCTGGCGCTG AACCAGGAGC GCCAGGCCAA GCTGGACCTG GAGCGCCAGC GCCTGCAGTT GGCCTTGCGT GAGGCCAAGC TGGCCAGCGT GCAGCAGCAG GGCAAGTGGG TCGAGTCGCA GATTGCCGCG TTGGCTTCGG AGCAGGCCGA TCGTGGCTTG GTGATGACCT TGGGCGATGT GCTGTTCGAT ACCGGCAGCG CCGACCTGAA GAACTCGGCC AGCCGTACTG TGCTCAAGCT GGTGCAGTTC CTGCAGCTCA ACCCGCGCCG GGTAGTGCGT ATCGAGGGCT ATACCGACAG TACTGGCGCG GGCGAGGAGA ATCTCAAGCT GTCGCGCGAC CGGGCGCAGT CCGTGGCCGA CATGCTTGTG GACCTGGGCA TCGATGAAAA GCGCCTGCAG GTTGAGGGCT ATGGCGACCA GTACCCGATC GAGGCCAATG CTTCGGAGCG GGGCAGGGCG CAAAACCGTC GAGTGGAGAT CGTATTCTCC GATGACAAGG GTCGGCTCGC GCCAGCGCGC TGA
|
Protein sequence | MIRRTPLAAL ALLALTAGLQ GCASQRSSAA LDEATVAFQG VKDDSDVLRS APRDVIRAGE SLARAERLSS YIGTGSDVRH YAYLSQRYSE IAREHAKLAL NQERQAKLDL ERQRLQLALR EAKLASVQQQ GKWVESQIAA LASEQADRGL VMTLGDVLFD TGSADLKNSA SRTVLKLVQF LQLNPRRVVR IEGYTDSTGA GEENLKLSRD RAQSVADMLV DLGIDEKRLQ VEGYGDQYPI EANASERGRA QNRRVEIVFS DDKGRLAPAR
|
| |