Gene Pput_1649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1649 
Symbol 
ID5192441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1853700 
End bp1854101 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content54% 
IMG OID640586119 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001266989 
Protein GI148546887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.50552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATGTC CAATATGCGG CGGCTCGGAG CTTGCACCTG ACATTCAGGG CATGCCCTAT 
AGCTACAAAG GCGAGATGAC AGTGATCCCT GAGGTAAGTG GCGATTACTG CTCCGCATGT
GGTGAATGTG TACTGAGTCA TGATGAAGCC ATGCGCGTCA GTCACTTGAT GACGGCATTC
GAGCGCCAGG TCAACGCAAA TGTTGTGGAT CCTTCCTTTA TTGCCTCCAT ACGCAGAAAG
TTCGACCTCG ACCAGCGTGA AGCGGGGGAA ATCTTCGGTG GTGGGGTCAA TGCGTTCTCC
CGTTATGAAA ACGGCAAGAC CACCCCGCCA GTGGCGTTGG TGAAACTGCT CAAGCTGCTG
GATCGCCATC CAGAACTCTT TGAGGAAGTG CGTACTGCCT GA
 
Protein sequence
MRCPICGGSE LAPDIQGMPY SYKGEMTVIP EVSGDYCSAC GECVLSHDEA MRVSHLMTAF 
ERQVNANVVD PSFIASIRRK FDLDQREAGE IFGGGVNAFS RYENGKTTPP VALVKLLKLL
DRHPELFEEV RTA