Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1649 |
Symbol | |
ID | 5192441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1853700 |
End bp | 1854101 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640586119 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001266989 |
Protein GI | 148546887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.50552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATGTC CAATATGCGG CGGCTCGGAG CTTGCACCTG ACATTCAGGG CATGCCCTAT AGCTACAAAG GCGAGATGAC AGTGATCCCT GAGGTAAGTG GCGATTACTG CTCCGCATGT GGTGAATGTG TACTGAGTCA TGATGAAGCC ATGCGCGTCA GTCACTTGAT GACGGCATTC GAGCGCCAGG TCAACGCAAA TGTTGTGGAT CCTTCCTTTA TTGCCTCCAT ACGCAGAAAG TTCGACCTCG ACCAGCGTGA AGCGGGGGAA ATCTTCGGTG GTGGGGTCAA TGCGTTCTCC CGTTATGAAA ACGGCAAGAC CACCCCGCCA GTGGCGTTGG TGAAACTGCT CAAGCTGCTG GATCGCCATC CAGAACTCTT TGAGGAAGTG CGTACTGCCT GA
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Protein sequence | MRCPICGGSE LAPDIQGMPY SYKGEMTVIP EVSGDYCSAC GECVLSHDEA MRVSHLMTAF ERQVNANVVD PSFIASIRRK FDLDQREAGE IFGGGVNAFS RYENGKTTPP VALVKLLKLL DRHPELFEEV RTA
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