| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1642 |
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| Symbol | |
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| ID | 5191058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1846202 |
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| End bp | 1847491 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586112 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_001266982 |
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| Protein GI | 148546880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC GCCGCAATTT TCTCAAAAGG GCCGGCATCC TCGCCGCCGG CCTGCCCCTC
GCCAGCGATC TGCTACCCGT TGCCGAGGCC GCCACGCCGA TACCGAGCGC CGGCAACCAA
CGATGGGCCG ATTTTCGCCG CCTGTTCGAA CTCAACCCAA ACTATGCGCA CTTCGCCAAC
TTTCTGATCA CCTCTCATCC AAGGCCGGTA CGCGAAGCCA TCGAGGCCCT GCGTGCACGT
TTCGACCGTC ACCCGGCGCT GATGGTCGAC TGGGATGCCC AGTCGGAGTG GAAGCATGAG
GCTGAGGTAC GCCAATGGGC GGCACGCTAC CTGGAGGTGG CGCCACGCCA GATTGCCCTG
ACGGGCAGCA CTACCGAGGG CCTGGGTTTG ATTTATGGCG GCATCAAGCT GGCGCCCGGC
CAGGAAATCC TGACCACGGT GCACGAGCAT TCCGCCGCAC GGCAGACCAT GAACTACCGC
AGCGCCCGCG ATGGCAACCC GGTACGCAGG CTACGCCTGT TCGAGCAACC CTGGCAGGTG
AGCACCGACC AGGTGCTGGG TACCGTGCGG GCCGCCATTT CCCCGCAAAC GCGCGTGCTG
GGCATGACCT GGGTACATTC GGGCAGCGGG GTGAAACTGC CGGTTGGCGA AATCGGTGCG
CTCCTACGCG AGGTCAATCA GAACAGGGAC GAACGCGACC ATATCCTGTA TGTCATCGAC
GGGGTTCACG GTTTTGGCGT CGAGGACATG CGCTTCGCCG ACCTGAACTG CGACTACTTC
ATATCCGGGA CCCACAAGTG GATGTTCGGC CCCCGCGGGA CAGGCATCAT CTGCGCCGCA
TCCTCGGCAC TGGGGCAGCT GCAACCGAGC ATCGCCACCT TCTCGGAAAA CGAAGACTTC
GCCACCATCA TGAGCCCGGG CGGTTACCAC GCCTTCGAGC ACCGCTGGGC CCTGGGCAAG
GCGTTCGAAC TGCACCTGCA AACCGGCAAG GCTGCCGTGC AGGCACGCAT CCACGCCCTC
AACGACTACC TGAAGCAACA GCTGGAAAGC CTGCCTGCCA TCGAGCTGGT GACGCCGCGC
AGCAGCACCC ATTCGGCGGG CTTCACCTTC TTTCGCGGCA AAGGCCAGGA CGCCGACGCG
CTGGCCAGGT ACCTGACTAG CCAACGCATC ATCGTCGACG CCGTCTCGCG CGATGCCGGG
CCAGTGGTGC GCACTGCGCC GGGTTTGCTG AATACCGAAG CGGAAATCGA CCGCTTGGTC
GAAGTACTGC GCCAACGCCT GCGCGCCTGA
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| Protein sequence | MNDRRNFLKR AGILAAGLPL ASDLLPVAEA ATPIPSAGNQ RWADFRRLFE LNPNYAHFAN
FLITSHPRPV REAIEALRAR FDRHPALMVD WDAQSEWKHE AEVRQWAARY LEVAPRQIAL
TGSTTEGLGL IYGGIKLAPG QEILTTVHEH SAARQTMNYR SARDGNPVRR LRLFEQPWQV
STDQVLGTVR AAISPQTRVL GMTWVHSGSG VKLPVGEIGA LLREVNQNRD ERDHILYVID
GVHGFGVEDM RFADLNCDYF ISGTHKWMFG PRGTGIICAA SSALGQLQPS IATFSENEDF
ATIMSPGGYH AFEHRWALGK AFELHLQTGK AAVQARIHAL NDYLKQQLES LPAIELVTPR
SSTHSAGFTF FRGKGQDADA LARYLTSQRI IVDAVSRDAG PVVRTAPGLL NTEAEIDRLV
EVLRQRLRA
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