Gene Pput_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1595 
Symbol 
ID5193624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1786821 
End bp1787240 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID640586065 
ProductMerR family transcriptional regulator 
Protein accessionYP_001266935 
Protein GI148546833 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.146181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATTG CCGACGTCGC CAAACGCACT GGCGTACCTG CATCGACACT GCGTTACTAC 
GAGAAGAAAG GCTTGCTCAA GTCGCTTGCC GGGCACGGTC AGCGTCGACA GTTTGCAGCC
GATGTGGCAG ACCGGTTGGC GCTGATCGCC CTGGGGCAGG CCGCGGGGTT TTCGCTGGAT
GAAGTGGGGA CGATGCTGGT GGACCTGCAG GTCGACCGAC AGATGCTGAT AGCAAAGGCG
GACGAGCTGG ATGCGCGGAT CAAGCGGTTG CAGGCGATGA GCAAGGGGTT GCGGCATGCG
GCGCAATGCC CTGAGAAAGA TCATCTGGCA TGCCCGAAAT TCCAACGGCT GATGAAGCTG
TCGGCGGCGG GAGCATTGGG CGAAAAGCAG GAAAGAACGA AGGCGTTTGT TACAGATTGA
 
Protein sequence
MDIADVAKRT GVPASTLRYY EKKGLLKSLA GHGQRRQFAA DVADRLALIA LGQAAGFSLD 
EVGTMLVDLQ VDRQMLIAKA DELDARIKRL QAMSKGLRHA AQCPEKDHLA CPKFQRLMKL
SAAGALGEKQ ERTKAFVTD