Gene Pput_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1580 
Symbol 
ID5190321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1765917 
End bp1766420 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content59% 
IMG OID640586049 
Productureidoglycolate hydrolase 
Protein accessionYP_001266920 
Protein GI148546818 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.190987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC TGATGATCGA GCCCTTGACC AAAGAAGCCT TCGCCCAGTT CGGAGACGTG 
ATCGAAACCG ACGGCAGCGA CCACTTCATG ATCAACAACG GCTCGACCAT GCGCTTTCAC
AAGCTCGCCA CGGTCGAAAC CGCCGAGCCT GAAGACAAGG CGATCATCAG CATCTTCCGC
GCCGACGCGC AGGACATGCC GCTGACCGTG CGCATGCTGG AACGCCATCC GCTGGGCAGC
CAGGCTTTTA TCCCGCTGCT CGGCAACCCC TTTCTGATCG TGGTCGCGCC CGTTGGCGAT
GCACCTGTAT CAGGCTTGGT CCGAGCCTTC CGCAGTAATG GCAGGCAGGG CGTTAATTAC
CATCGCGGCG TCTGGCACCA CCCGGTGCTG ACGATCGAAA AGCGGGATGA TTTCCTGGTG
GTTGATCGCA GTGGTTCTGG CAACAACTGC GATGAGCATT ACTTCACCGA GGAACAGATG
CTGATCCTCA ATCCCCACCA ATAA
 
Protein sequence
MRTLMIEPLT KEAFAQFGDV IETDGSDHFM INNGSTMRFH KLATVETAEP EDKAIISIFR 
ADAQDMPLTV RMLERHPLGS QAFIPLLGNP FLIVVAPVGD APVSGLVRAF RSNGRQGVNY
HRGVWHHPVL TIEKRDDFLV VDRSGSGNNC DEHYFTEEQM LILNPHQ