Gene Pput_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1483 
Symbol 
ID5192197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1667659 
End bp1668768 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content56% 
IMG OID640585953 
ProductN-acetylneuraminic acid synthase domain-containing protein 
Protein accessionYP_001266824 
Protein GI148546722 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.193317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.585828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACCA TTAGTCAGCG TGACAAAGAT CTGTTTGAAA ACCTGTTCGT ACTGGAGCTC 
GCCAACAATC ATTGGGGCAA GCTGGAGCGC GGGCTGAAAA TTGTCCGCGA CCACGGAACG
ATCGCGCGTT ACAACAACGT CAAGGCTGCC ATCAAGCTGC AGTTTCGCGA TGTCGATGAG
TTCATTCATC CTGATTTCAA GGGTACCGCA GACCTTCGCT ATGTGAAGAA GACCGAGGAC
ACTCGCCTGA CCAAGGCAGA GTTTGCCCGC ATGGTGGAAG AAGTCCGCAA CCTGAGCTGC
ATTCCCATGG CGACCCCATT CGACGAAGCC TCGGTCGACC TGTGCGTCGA ATTCGACATG
CCGATCATCA AGATCGCCAG TTCCGACATG AACGACTGGC CGCTTATCGA GAAAATCGCG
TCCACCCGCC GGCCAACCAT CATTTCCACG GGCGGCGCAT CGGAAAAAGA CCTGGACGAT
ATCGTTCGCT ACTTTGAAAA GCGTGATATC CCGCTGGCCA TCAACCATTG TGTTTCGCTG
TACCCCAGCG AGGACGACGA GCTGCAGCTC GACCAGATCG ACTACCTGCG CAACCGTTAC
CCTGGGCATG TCATTGGCTT GTCTACCCAT GAGTACCACG ACTGGCACTC GTCCATGCTC
ATTTCCTACG GTAAAGGTGT ACGTACCTGG GAAAGGCACA TTGATATCCA ATACCAAGGT
GTGCCGGTTT CCAACTACTG CTCGCTCCCT GAGCAATGCG ATACCTGGTA CAAGGCCTTC
CACAAGGCCA AGGAAATGTG CGGGGGTGTC AGCGGCACTC GACGCATCAT TTCGCGTAAA
GAAACCGAGT ACCTCAATGC ACTCGTGCGC GGTGCCTATG CACGTCGGGA CCTGTCGCCG
GGCTACGTGC TGAACCGGGA CGAGTTCGAA AAGGACTTCT ACCTTGCAAT CCCGCTGCAC
AAAGGGCAGC TGTCCTGCCG GGAAGTGATG AACGGTGAAA CGCTGCTGCA GCCGATCAAG
GCAAACGAAC GCCTGACCAT CGACCACATT GACGGGCCTT ACAGTGAAAC CCCGGCACTG
AAAGAACTGA TCCTGGGCCG GGGGCTGTGA
 
Protein sequence
MKTISQRDKD LFENLFVLEL ANNHWGKLER GLKIVRDHGT IARYNNVKAA IKLQFRDVDE 
FIHPDFKGTA DLRYVKKTED TRLTKAEFAR MVEEVRNLSC IPMATPFDEA SVDLCVEFDM
PIIKIASSDM NDWPLIEKIA STRRPTIIST GGASEKDLDD IVRYFEKRDI PLAINHCVSL
YPSEDDELQL DQIDYLRNRY PGHVIGLSTH EYHDWHSSML ISYGKGVRTW ERHIDIQYQG
VPVSNYCSLP EQCDTWYKAF HKAKEMCGGV SGTRRIISRK ETEYLNALVR GAYARRDLSP
GYVLNRDEFE KDFYLAIPLH KGQLSCREVM NGETLLQPIK ANERLTIDHI DGPYSETPAL
KELILGRGL