Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1482 |
Symbol | |
ID | 5192196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1664016 |
End bp | 1667504 |
Gene Length | 3489 bp |
Protein Length | 1162 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585952 |
Product | glycosyl transferase family protein |
Protein accession | YP_001266823 |
Protein GI | 148546721 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.345967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.675162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTG TGAGCACTCA GCACTATCCG CCATTGCACG TTGTGTCGCC GCGCCCGTAT TACATCGTTG CGCCCGCCTA CCGGCATAAC TCGGCCGGTA TCCGGGTGAT GCACATGTTG TGTCACCTGC TGAACCGGTG CGGCCAGGAT GCCTACCTGT ACAGCTCCAC GACCAACCCG ATGTGGCACA CCCCGCTGCT CACCAATGAG CTGAGGCAGC AGCATGAGCA GGCCGGGCGC CAGCCTATCG TGGTGTACCC GGAGGTGGTC TCGGGGAACC CGACCAACGC ACGGTCGGTA GTGCGTTACT TGCTCAACGT GCCAGGGTTG ATCGCAGGGG ATACGGAGTT TGCCGACTCG GAAATGATCT TTGCCTACGG TGAGCATCTG CTGCCCAAGG GGGCAGGGGC TGAGCGCATA CTGTTTCTGC CGCCGATCGA CACGTCGCTG TTCAACAACC ATGGCAACCC CTATGACGGC CATCGCAAAG GTTGGCTGAT CTATCCGGGG CGCCATACCC ATGCACTTCA GGAACACCCC GAGCTGGCGG CGAGGTGCAC GCTCATTACC AACGAATGGC CAGCCACCCC TCGGGAAATG GCTGAGCTGT TCCGGCGCAG TGAGGGCATT TATTGCTTCT CTTCCACCGC AACTGCGCTG GAAGCGATGT TGTGTGGTTG CCCGGCCGTG GTGCTCAAAT CGCCCTTTTT CGATGGTACG CCGCTTGGTA TTGGCGAGTT CGGCACACAC GGGCTGGCCT TCGAAGACAC GCCTGAGGCT ATCGAGCATG CCCGATCGGG TTTGGCCATC GTTCAGCAAA AGTACGCTGA CTTGCAGGGC CGGTTCTGGG AACAATTGGC CAGTTTCATC GAACAGACCC AGGCCATGCC TTGCACAGAC CTGCAACCAG ATGCCATGCA GGGGGCAGGT CGGCCAGATG CACAGGTTGC CCAGTGGCTG CGGTCCCGTC GCCCTACTGA TGCCCAGGCA GAGCTGATCG CCCGGCGTCT GGAAGACAGG CGCGTGGATT TGCCCTGGTT CGATTTCGTC ATCATCCCGG ACGGCCAGCC AGCTGCGGTC GAGGCGACGC GCAAAAGCCT GCAGGGGCAG ATGTATCAGC AGGTCGCCGT CCACTTGCCA GCTGATTGCG AGCTTGCCAC GCTTAACCAG TTGGTCCTGC AACAAGGGAC CGGACAGTGG CTCTGCTTTG TGCGTGCGGG TACCACGTTC ACACCGTTCG GGTTGTTGAT GCTCGCACTG GAATTGCTTG AGGGCGACCA AGTGCGTGCG GTGTATGCCG ATGAACTGGT TACCACCCCG CAGGGCACCC AACAGGCGCT GCTGCGCCCC GACTTCAATC TCGACATGCT GCTGGCCAGC CCGGCCCAAC TGGCGCGGCA TTGGTTCTAT CGCCGCGAGG TATTCCTTGA GGCAGGCGGT TTCGACCTGG CCTGCGCGGG GGCGGCCGAG CTCGCGTTGC TGTTGCACTT GATCGAAGAT GCCGATGGCC TCGACGGGCT GGCTCATGTC AGCGAGCCTG TGTGCATTTC GCCGGGCGAG GCGCCTGTTC ACAGCCCTCA GGAACAGGCG GTGCTGCTGC GCCATTTGCA ACGGCGCGGC TACACCCAGG CGCAGGTGCG CATGCACCGG CCAGGCATTC ATCGCATCGA TTATGGTCAC GCCGAGCAGC CATTGGTTTC GCTGGTTGTG CCATGCGGCG GGCGTCTCGA TCACGTACAA CGCTGCGTGC ATGCGTTGCT TGAAAAGACC CGTTACCCCC ACTTCGAGAT TTTGCTGGTA AACGATGGCA GCGGGAGCCC GGCTACCCGA GCCTGGCTGG CTGGCCTTGT GGCGCGGGAG CAAAACCGGG TCAGCGTGCT GAGTGACGCG TCGGTACGTG ACCATGCCTC GGCCTGTAAT CTGGCGGCCA GGCATGCGCG GGGCGAGTAC TTGGTGCTGC TGCACGAGGA TACTGTGGTT GTGCACGATG ACTGGCTGGA TGCTTTGCTC AACCACGGCC AGCGCCCGGA AGTAGGCATT GTCGGCGCCA GGTTGATGCA TCCCAATGGC ATGGTCGAAC AGGCTGTGCA GGTCCTGGGC TTGAACGGCC CTGGCAACTC GGCGTTTTCC GGGCTTGTGC AGGATGAGGG GTACATGCGC CGGCTTGAGC TGGATCAGAA CCTGAGTGCC GTGTCTGGCG CTTGTCTGCT GATTCGCCGG GCGCTTTACC AGGGTGTGGG TGGAATGGAC GAGCGCCTGA CGCAGCGCAC GGGTGCCAGC CTTGATCTAT GCCTGAAGGC GCGGCAGGCT GGTTATCTTA CGGTGTGGAC CCCCCATGCT GTGTTGGTGT GCGAAGGGCA GGGTGGGTGT CTGCCTGCCG AAGCGGTCGA GGCCGAACAG GAAACGGTGT ATGGCAGGTG GCTGCCTGTC ATCGCCCGCG ATCCGGCCTA CAACCGCAAC CTGTCTTTGC AGGGGGCGGG TTTTGAGCTC GAGACTGACC CGGGCCTGAC ATGGAACCCC CTGAGCTGGC GTCCGTTGCC CGTACTGTTG AGCATGCCGG GCGAACTTGC CGGCGCCGCT CGTAGCCGGA TCGTCGATCC TGCCTTGTCC ATGAGTATTG CCGGCCTGGC TGATGTCCGA CTGGCCTTGC GGCCTTATCT GCCCGCCGAG GTGGAGCGGT TGCAGCCCGA CAGTTGGGTC ATGGGGCGGC CGGCAAACGA CGCGCAAATT CAGGCGTTAC GTTGCAACGC CCGGTTCTCC CGCGCATTCA AGGTGGGTGA TGTGAATGCC GACTTACCTG GCCTGGCTGA AGACGATATT GCAGGTGCGC TGCGGTGGTC TGTCGGCGTT GTGGACCGGC TGGTAGTGCC AACCCAGGCT TTGGCTGAAG CGCTGCAAGG CTTCTGCGCC GATATTCGTG TCGTGCCGGA TCGTCTGCAC CCGGCCCGCT GGGGGGCGTT GGCCACTCGA CGGCAGCCAG GTAGTCGCCC TCGTATAGGG TGGGTGGGTG AGCAGTTCGA CGCCCGCGTT CAGCGCCTGA TGCTGGAGAT CGTTCAGGCC ATGCGTGCTG ATGTGGACTG GGTCTGTCTG GGTGAATGCC CGCCCCAGTT GCAGCCCTAC CTGCGCGAGT TACATGGCCC GGTGCCCTAC GATGACTACC CGCAAAAGCT CATGTCGCTG GGGCTCGACC TGGCGCTGGC ACCTCTAGGC GATGGCTGGC TTGACGCGTG TCGCAGCAAT GTGCGGCTTC TGGAATATGC CGCGTGCGGC TATCCGCTGG TTTGCAGTGA CGTGTTGCCC TATCAAGGGT TGCCCGTGAC CCGGGTCAGG AACACGGCCG GTGACTGGGT CAGTGCTATC CAGGCGCACC TTGCCGAGCC TGCTGCCAGC GCAAGGGGCG CGCAAGCACT GCGCGAGCTG GTGCTGGCAC GGCACATGCT GGATGAAGGC TATGCACGCC AATGGCTTGA CGCCTGGCTG CCAGGTTGA
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Protein sequence | MQLVSTQHYP PLHVVSPRPY YIVAPAYRHN SAGIRVMHML CHLLNRCGQD AYLYSSTTNP MWHTPLLTNE LRQQHEQAGR QPIVVYPEVV SGNPTNARSV VRYLLNVPGL IAGDTEFADS EMIFAYGEHL LPKGAGAERI LFLPPIDTSL FNNHGNPYDG HRKGWLIYPG RHTHALQEHP ELAARCTLIT NEWPATPREM AELFRRSEGI YCFSSTATAL EAMLCGCPAV VLKSPFFDGT PLGIGEFGTH GLAFEDTPEA IEHARSGLAI VQQKYADLQG RFWEQLASFI EQTQAMPCTD LQPDAMQGAG RPDAQVAQWL RSRRPTDAQA ELIARRLEDR RVDLPWFDFV IIPDGQPAAV EATRKSLQGQ MYQQVAVHLP ADCELATLNQ LVLQQGTGQW LCFVRAGTTF TPFGLLMLAL ELLEGDQVRA VYADELVTTP QGTQQALLRP DFNLDMLLAS PAQLARHWFY RREVFLEAGG FDLACAGAAE LALLLHLIED ADGLDGLAHV SEPVCISPGE APVHSPQEQA VLLRHLQRRG YTQAQVRMHR PGIHRIDYGH AEQPLVSLVV PCGGRLDHVQ RCVHALLEKT RYPHFEILLV NDGSGSPATR AWLAGLVARE QNRVSVLSDA SVRDHASACN LAARHARGEY LVLLHEDTVV VHDDWLDALL NHGQRPEVGI VGARLMHPNG MVEQAVQVLG LNGPGNSAFS GLVQDEGYMR RLELDQNLSA VSGACLLIRR ALYQGVGGMD ERLTQRTGAS LDLCLKARQA GYLTVWTPHA VLVCEGQGGC LPAEAVEAEQ ETVYGRWLPV IARDPAYNRN LSLQGAGFEL ETDPGLTWNP LSWRPLPVLL SMPGELAGAA RSRIVDPALS MSIAGLADVR LALRPYLPAE VERLQPDSWV MGRPANDAQI QALRCNARFS RAFKVGDVNA DLPGLAEDDI AGALRWSVGV VDRLVVPTQA LAEALQGFCA DIRVVPDRLH PARWGALATR RQPGSRPRIG WVGEQFDARV QRLMLEIVQA MRADVDWVCL GECPPQLQPY LRELHGPVPY DDYPQKLMSL GLDLALAPLG DGWLDACRSN VRLLEYAACG YPLVCSDVLP YQGLPVTRVR NTAGDWVSAI QAHLAEPAAS ARGAQALREL VLARHMLDEG YARQWLDAWL PG
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