| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1369 |
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| Symbol | |
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| ID | 5190409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1537898 |
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| End bp | 1539238 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640585834 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001266711 |
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| Protein GI | 148546609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.428314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACA ACAATACGTT GACGGAGTCC GTCGCCATGC CTGAGCCTGG AATCGAACGT
AAGACGAAAG CCAAGAAGGC CACTGCGGCA GCCGTCTTTG GTACGTTCGT TGAGTATTAC
GACTTCAGCA TCTACGGATA CCTTGCTGCC ACCCTTGCTC TGGTCTTCTT TCCTTCGGAC
GATCCGACAA CAGGGTTGCT CAACACCTTC CTGGTCTTCG GCTCGGCATT TCTTGTCCGC
CCGATTGGCG CAGTAGCGTT CGGCTGGCTC GGGGACAAGG TAGGACGTCG AGCAAGCCTG
ATTGCGAGCA TCACCCTGAT GGGGGCTGCC GCGACACTCA TCGGCCTGTT GCCTGGCTAT
GCGCAAATCG GCGTCTGGGC CCCTATTCTC CTCGTTGCAC TTCGCATGCT GCAGGGCTTC
TCTGCTGGCG GTGAAATCGG CGGCGCGGCC AGCTACATCC GTGAGTGGGC TCCAGCCAAT
CGTCGCTCGC TGTACATTTC CTTCCTGCCG TCGATTGCAC AGTTCGGTAA AGGGCTCGCC
GCAGCCATCG CCGGTCTTGC AGCTGCATGG CTGACCGACC CGCAGATGGC TGATTGGGGT
TGGCGTATTC CTTTCCTGCT GGCTCTGCCG CTCGGCATCA TTGGCCTGTG GATGCGCCTT
GGGATCGAAG ACAGCCCGGA ATTCGAATCG AAAAAAACCG ACGCGAACAA AGAACACAGC
GCACCTTTCG CTGAGCTCGT GCGTGATTAC ATGCGCCCGC TCACCAAGGT CATGATGATC
TCCCTGGTGC AGAACATCGG TACCTACATC GGCACTGTCT TCATCGCCGC GTACTTCAGC
TCAATCTTGG GCTACTCGAA GGGTCAAGCC TCCACCATCG TTCTGGTAGC AGTCAGCTTC
GCAGCCCTGA TGATCCCGCT GGCAGGTCAC CTTGGCTCGA TCATCGGCAG CAAAGCCGTG
CTGCGCCTGG CCTACCTCGG CTACGCAGTT CTTTCCGTCC CATCGTTCCT CCTCATGCAG
CAAGGCCAGG TCAGCATGGC TATGGCTGGA CTGGCCCTGG GAATGATCCC TTACGCGCTG
TGCCTGGCCG GCACCTACTC GGTCATGCCT GAGTTCTTCC CTACCCACGT TCGCCATACC
GGCGTCGCGT TTGGCCACAG CGTTGGTGCC GTTATCGGCG GCGGCATTGG GCCTTTCATG
GCCACCTGGC TAATCGGCGC GACCGGTAAC CAAACGGCAC CCGCTTTCAT CCTGAGCTGT
GCCGGTGTTC TCGGCCTGAT CGTGTTGTGG ACTGTCCGCA ACCAAGCTGC CGCCGACGAC
AAAAAACATC AATTCGCCTG A
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| Protein sequence | MNNNNTLTES VAMPEPGIER KTKAKKATAA AVFGTFVEYY DFSIYGYLAA TLALVFFPSD
DPTTGLLNTF LVFGSAFLVR PIGAVAFGWL GDKVGRRASL IASITLMGAA ATLIGLLPGY
AQIGVWAPIL LVALRMLQGF SAGGEIGGAA SYIREWAPAN RRSLYISFLP SIAQFGKGLA
AAIAGLAAAW LTDPQMADWG WRIPFLLALP LGIIGLWMRL GIEDSPEFES KKTDANKEHS
APFAELVRDY MRPLTKVMMI SLVQNIGTYI GTVFIAAYFS SILGYSKGQA STIVLVAVSF
AALMIPLAGH LGSIIGSKAV LRLAYLGYAV LSVPSFLLMQ QGQVSMAMAG LALGMIPYAL
CLAGTYSVMP EFFPTHVRHT GVAFGHSVGA VIGGGIGPFM ATWLIGATGN QTAPAFILSC
AGVLGLIVLW TVRNQAAADD KKHQFA
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