Gene Pput_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1333 
Symbol 
ID5194898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1498366 
End bp1498791 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content63% 
IMG OID640585800 
Producthypothetical protein 
Protein accessionYP_001266677 
Protein GI148546575 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.132066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CAGCCGAATC CGAAATCCGC CAATTGATCG AGCGCTGGAT GCAAGCCGTG 
CGCGATCGCG ACATCCCGGG CATCATCGCC CCCTACGCCG ACGATATCGT CGCCTTCGAT
GCCATCCAGG CCCTGCAATT CAAAGGCAAG TCTGCCTACA CGGCGCACTG GGAAATGTGC
ATGGGCATGT GCACCGGCCC CATGGTGTTC GAACTTGCCC AACTCACCGT GCACGCCGCT
GGCGATCTGG CCCTGGCCCA TTGGCTGAAC CGCTGCGGCC CGGGCGACGA CGAAAGCCAG
TGCGGCTTCA TGCGCGCCAC GGTGGGCTAT CGTCGTCAAG GCGGCCAGTG GCAGGTCATC
CACGAACACT GGTCGGCGCC TTTCGACATG GAAACGCAAA AGGCCCTGTT CGATCTCAAG
CCCTGA
 
Protein sequence
MSTAAESEIR QLIERWMQAV RDRDIPGIIA PYADDIVAFD AIQALQFKGK SAYTAHWEMC 
MGMCTGPMVF ELAQLTVHAA GDLALAHWLN RCGPGDDESQ CGFMRATVGY RRQGGQWQVI
HEHWSAPFDM ETQKALFDLK P