| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1283 |
|---|
| Symbol | |
|---|
| ID | 5193192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1450190 |
|---|
| End bp | 1451767 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640585751 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001266628 |
|---|
| Protein GI | 148546526 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.435 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTCA CAGGCAACCT GCTGATCGGC CAGAGGCCGG TAACCGGCAG CCGCGACGCC
ATCCGTGCCA TCGACCCAAC CACCGGTCAG ACGTTGGAGC CGGCCTACCT CGGCGGCACC
GGCGAACACG TGGCCCAGGC CTGCGCGCTG GCCTGGGCGG CATTCGACGC CTACCGCGAA
ACCTCGCTCG AACAACGAGC AGACTTTCTT GAAGCCATCG CCACACAGAT CGAGGCCCTC
GGCGATGCCC TGATCGACCG TGCCATGGCC GAAACCGGTC TGCCCAAGGC ACGCATTCAG
GGCGAGCGTG GTCGTACCTG CACCCAGCTA CGCACCTTTG CCCGTGTAGT GCGGGCCGGC
GAATGGCTGG ACGTGCGGGT CGACAGCGCC CTGCCTCAGC GCCAGCCCCT CCCCCGCGCT
GATTTGCGCC AGCGCCAGGT GGCCCTGGGG CCAGTCGCCG TGTTCGGCGC CAGCAATTTC
CCGCTGGCCT TCTCGGTAGC CGGTGGTGAC ACCGCGTCGG CATTGGCCGC TGGCTGCCCC
GTGGTGGTCA AGGCCCACAG TGCCCACCCC GGCACCAGTG AGCTGGTCGG CCAGGCGGTG
GCGCAAGCGG TGAAGCAGTG CGGCTTACCG GAGGGTGTGT TCTCGCTGCT TTATGGCTCG
GGCCGCGAAG TGGGCATTGC CCTGGTCAGC GACCCGCGTA TCAAGGCCGT TGGTTTCACC
GGCTCGCGCA GCGGTGGCAT GGCGCTGTGC CAAGCCGCCC AGGCGCGCCC GGAGCCCATC
CCGGTGTATG CCGAAATGAG TTCGATCAAC CCGGTGTTCC TGTTCGACGC CGCTCTGCAA
ACCCGTGCCG AAACACTGGC ACAAGGTTTC GTCGCCTCGC TGACCCAGGG CGCCGGCCAG
TTCTGCACCA ACCCGGGCCT GGTAATCGCC CGGCAGGGGC CGGCCCTGCA GCGGTTCATC
ACTGCAGCCG CCGGTTACGT GCAGCAGGCC CTCGCCCAAA CCATGCTCAC CCCCGGCATT
TTCAGTGCCT ACCAGGCCGG TATCGCAGCC CTGGCAGACA ACCCCTGTGC CCAAACCATC
GCCAGTGGCC AAACCGATCA GGGCCCCAAC CAGTGCCAGG CACAGTTGTT CGTGACCCAG
GCCGACGCGT TTCTCGCCGA CCCGGCGTTG CAGGCTGAAG TGTTCGGTGC AGCGTCGCTG
GTCGTTGCCT GCACCGACGA TGAGCAGGTC CGCCAGGTAG CCGAACACCT GGAAGGTCAG
CTGACCGCCA CCCTGCAACT GGACGAGGCC GACATCGACA GCGCTCGCGC CCTGCTCCCC
ACCCTTGAGC GCAAGGCCGG GCGCATTCTG GTCAATGGCT GGCCGACCGG CGTCGAGGTG
TGCGATGCCA TGGTCCACGG CGGGCCGTTC CCGGCCACTT CCGATGCCCG CACCACCTCG
GTGGGCACCG CGGCGATCCT GCGTTTCCTG CGCCCGGTTT GCTATCAGGA CTTCCCCGAT
GCGCTGCTGC CGCAGGCATT GAAACACGGC AACCCGCTGC AGCTGCGGCG CCTGCTAGAC
GGCAAACGGG AAGGCTGA
|
|---|
| Protein sequence | MPLTGNLLIG QRPVTGSRDA IRAIDPTTGQ TLEPAYLGGT GEHVAQACAL AWAAFDAYRE
TSLEQRADFL EAIATQIEAL GDALIDRAMA ETGLPKARIQ GERGRTCTQL RTFARVVRAG
EWLDVRVDSA LPQRQPLPRA DLRQRQVALG PVAVFGASNF PLAFSVAGGD TASALAAGCP
VVVKAHSAHP GTSELVGQAV AQAVKQCGLP EGVFSLLYGS GREVGIALVS DPRIKAVGFT
GSRSGGMALC QAAQARPEPI PVYAEMSSIN PVFLFDAALQ TRAETLAQGF VASLTQGAGQ
FCTNPGLVIA RQGPALQRFI TAAAGYVQQA LAQTMLTPGI FSAYQAGIAA LADNPCAQTI
ASGQTDQGPN QCQAQLFVTQ ADAFLADPAL QAEVFGAASL VVACTDDEQV RQVAEHLEGQ
LTATLQLDEA DIDSARALLP TLERKAGRIL VNGWPTGVEV CDAMVHGGPF PATSDARTTS
VGTAAILRFL RPVCYQDFPD ALLPQALKHG NPLQLRRLLD GKREG
|
|---|
| |