| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1238 |
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| Symbol | |
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| ID | 5192112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1405545 |
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| End bp | 1406138 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585704 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001266583 |
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| Protein GI | 148546481 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.267087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA TCGTCCATCT GGTGACGGGC GTCGCAGCTT TGCTGCTATC GCTCATACCC
AGCCTGAAAA CCGATGCGAC ACCCTTCCTG CAACAACCCG ACGCGGTCTA CCTGGCCCTG
CTCGGCCTGC TCAATCTGGT GCTGGCCCCG GTCGTGCCGC TGTATCATCG CGGCGCGCGG
CAACAACTGC AGCACCTGGC CTGCGCCCTG CTGGTGGTCG CCGTCGTGCT GCAGACCCTG
ACGCTACTGG CCCGCCCGGA AATGGGCAAC CTGGCAGCCC TGGTGTGTGC GGCGCTGGCC
GTGGCCCTGC ATCTGGCCGT GGGCTTTGCC CGCAGCCCGC GCAAGGCACG CGGCAGTCAA
CACGTGGCAC AAGATGCCGG CAACCGTGAT ACCGGCACCG TCAAATGGTT CAACACATCG
AAAGGCTTTG GTTTCATCTC CCGAGACTCG GGTGATGACA TTTTCGTGCA CTTTCGGGCC
ATCCGCGGCG AGGGCCACCG CATTCTGGTC GAAGGCCAGC GCGTGGAGTT TTCGGTGATG
CACCGCGACA AGGGCCTGCA GGCCGAAGAC GTGGTTGCAG TAACCCGCCG CTGA
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| Protein sequence | MFKIVHLVTG VAALLLSLIP SLKTDATPFL QQPDAVYLAL LGLLNLVLAP VVPLYHRGAR
QQLQHLACAL LVVAVVLQTL TLLARPEMGN LAALVCAALA VALHLAVGFA RSPRKARGSQ
HVAQDAGNRD TGTVKWFNTS KGFGFISRDS GDDIFVHFRA IRGEGHRILV EGQRVEFSVM
HRDKGLQAED VVAVTRR
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