Gene Pput_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1213 
Symbol 
ID5195303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1376699 
End bp1377400 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID640585676 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001266558 
Protein GI148546456 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2977] Phosphopantetheinyl transferase component of siderophore synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.04575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC TTCCTGCCTG TTGCGCCCCG CTCCAGCACC ACTGGCCCCT GCCCCGCCCA 
TTGCCCGGCG CGGTGCTGGT CAGTTGCGCC TTCGACCCTG CCCACTTGGC CGCCGACGAC
TTCCAGCGCG CTGGCGTACT GCCCAGCGCC AGCCTGCTGC GCTCGGTGCC CAAGCGCCAG
GCCGAGTACC TGGCCGGCCG CGTATGTGCC CGCGCCGCGC TCCAGCACCT GGACGGCCGC
GACTACGTGC CCGGCACCCA CGAAGACCGC TCGCCCATCT GGCCCGCCGG TATTCATGGC
TCGATCACAC ACGGCAAGGG CTGGGCCGCC GCGGTGGTCG CCGGCGAAAA CAGCTGCCAA
GGTCTGGGCC TGGATCAGGA AGCCTTGCTG GATGACGCGC GCGCCGAGCG GCTGATGGGC
GAAATCCTTA CCCCGGCAGA GCTGGAGCGC CTGGACCGCC GCCAGCTTGG GCTTACGGTC
ACCCTGACGT TCTCGCTGAA GGAAAGCTTG TTCAAGACCC TGTACCCACT GACTCGCCAA
CGCTTCTACT TCGAACACGC AGAAGTGCTC GACTGGTCCG CAGAAGGGCT GGCGCGCTTG
CGCCTGCTCA CCGACCTGTC ACCGCAGTGG CAGCAAGGCG CAGAGCTGCA AGGCCAGTTC
TGCCTGCAGG ACGGCCACCT GCTGAGCCTG GTCAGCGTCT GA
 
Protein sequence
MNTLPACCAP LQHHWPLPRP LPGAVLVSCA FDPAHLAADD FQRAGVLPSA SLLRSVPKRQ 
AEYLAGRVCA RAALQHLDGR DYVPGTHEDR SPIWPAGIHG SITHGKGWAA AVVAGENSCQ
GLGLDQEALL DDARAERLMG EILTPAELER LDRRQLGLTV TLTFSLKESL FKTLYPLTRQ
RFYFEHAEVL DWSAEGLARL RLLTDLSPQW QQGAELQGQF CLQDGHLLSL VSV