Gene Pput_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1074 
Symbol 
ID5191698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1208138 
End bp1209613 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content59% 
IMG OID640585532 
Producthypothetical protein 
Protein accessionYP_001266419 
Protein GI148546317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTAT CAGCTTACGT CCCTAGCTGG GACGACATCG AACGCAACCT GGACCAGAAG 
TTCAGCGCCC TGAATCAGAG CGTCAGCAGC GGGTTGCGCA GTGCCCATGA CAGCTGGGAC
GGCTTCACCC GCCGTGTAAG CGATGGCGCC AGCCAGGCCT ATGGCGCTGT AGGCGGGCAC
CGGATCGACA ACGTCCGGCA GGCGATGGCG CTGTCCTATC CCATGATGCA GTCAAATCTG
TCCCGCAAAT GGGCATCCAT CAACATCGAC CAGATTTTGC CCGTGCTGCT CAAGCTCGTG
CAGGAAGTGG TGATGATTCT CGGCGGCAGC GTCGCGCTAG GCGGCGCTAT AGGCGGCGCG
GTAGGTTCTC TTGCCTTTGG CGTGGGCGCG GCACCTGGGG TGGTCGCAGG CAGCGGTATC
GGCCTGCAGG TCGGTAACCT GATCCTGATG GCATTGGGCC TGGCCGCCAT CGCGGAGTAT
TTCTATCAAG GGCTTCCCGC CTGCCTGGCC TCGATGCAAG AGGGGCTTGC AACCGCGTGG
ACTGCCGAAG ACGGCCTGAA ACCCTCGGGT CTCGACCCTT CGGGCGGCTC GGCCGCGCTG
GTTCAAGAAC GTACCGAACA AGCTGCAAGG CAACTGGCAC GCGGACAAGA GCAACTCGTG
ATGCTTTTGC TGATGGCGAT CGTGACCTAC CTGACCCGCG GGCAGATGAA AGCCGGCGTG
ATGAGCAGCA TGGAAAGCAT CGCCAGCCGC AGCGCCAAGC TTCAGGCCGA GATTTCCAAC
AAGCAGTTGG CCAACTGGCT GGCAAAAAAC CAGAACAGGC TGCTGATCGA ACCTGAGCTG
CAGATGAAAA CCGCAACGCC GCTTAAGAAA GCGGAGCCAG AGCTGCCCCC AGCGACGCAA
GCCACGGAAA AAACCGTTGC AGCGGCGCCG AAGAAGCTCA TGAGCCTGCG CGATGCAGTG
GGCAAGGACA TGGCAGAGCG ATGGATTGCC GAAGGCCGCG CTCGGGCAGA CATACGGGCC
CCGGAGCTTT CGAGACTGCT CAGCGACGAT CAAATAGGCG CACTTTACGG CTACTCTACC
AACGATGTGT ACAAGGCGTA TAACCAAGCA TTGCGCGAAG GCACTGCTAC GCCTGGTATC
AAGGCCTTTG CCGAGCATGC AACCGAAGGC CTGGCACGCT TGCCTCGCTA CTTAGGCGCT
GAAACCTATC GTGGAACGGA TCTTCCGCAG CATGTGCTCA ATCGGATGCA AATGGGTGCA
GTAGAGACCG ACATGGCATT CTTCAGCTCA TCCGCTACAA CACCGTTTTC GGGCAATACC
CAGATGGTCG TACGCGGCGT ATCCGGCAAG GACATCAGTT TCCTCACGCA AATTCCCGAA
GCGGAGGTAC TGTACCCGCC AGGTACCTCT TTCAGAGTAC TGAATCGGAT TGAACAAGGC
CCCACGACTC GTCTCTTATT AGAAGAAGTA CTATGA
 
Protein sequence
MDLSAYVPSW DDIERNLDQK FSALNQSVSS GLRSAHDSWD GFTRRVSDGA SQAYGAVGGH 
RIDNVRQAMA LSYPMMQSNL SRKWASINID QILPVLLKLV QEVVMILGGS VALGGAIGGA
VGSLAFGVGA APGVVAGSGI GLQVGNLILM ALGLAAIAEY FYQGLPACLA SMQEGLATAW
TAEDGLKPSG LDPSGGSAAL VQERTEQAAR QLARGQEQLV MLLLMAIVTY LTRGQMKAGV
MSSMESIASR SAKLQAEISN KQLANWLAKN QNRLLIEPEL QMKTATPLKK AEPELPPATQ
ATEKTVAAAP KKLMSLRDAV GKDMAERWIA EGRARADIRA PELSRLLSDD QIGALYGYST
NDVYKAYNQA LREGTATPGI KAFAEHATEG LARLPRYLGA ETYRGTDLPQ HVLNRMQMGA
VETDMAFFSS SATTPFSGNT QMVVRGVSGK DISFLTQIPE AEVLYPPGTS FRVLNRIEQG
PTTRLLLEEV L