| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0978 |
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| Symbol | |
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| ID | 5192345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1104934 |
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| End bp | 1108749 |
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| Gene Length | 3816 bp |
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| Protein Length | 1271 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585436 |
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| Product | hypothetical protein |
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| Protein accession | YP_001266323 |
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| Protein GI | 148546221 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGTC TGAACCGCGT TCTTGTTGCT CTGACCCGCT GGGGGTTGGG CATATGTGCC
CTGCTGGCAG TTTTGGTGGC GCTGTATGTC AGCCTTGGTC GTGAACTGGT GCCGCTGGTA
GCCGAGTACC GTGCCGACGT AGAAAGCAAG GCCGAGCAGG CGCTGGGCAT GCCCGTGCAT
GTCGGTGCCC TGGAAGGGCA CTGGAGCGGA CTGGCCCCTG TGCTGCGGGT GCGCGACCTG
CAATTGGGCG AAGGCACCAA GGCGCTCCGG CTGGACGACG TCATGGTGGT GCCCGACATC
TGGGCCAGCC TCACCGCCCG CGAAGTCCGC CTGGCGCGCA TCCAGCTGGG CGGGCTGCAA
CTGATCCTTC GCGAGAACGA GCAGGGCGCC TGGAGCCTGG AAGGCCTGCC GAAGAAGGAC
GACGCGCCGC TGGACCCTGC CGACTTGCTG CAGCGCCTGC GCCAGCTGGG GCGCATCGAT
GTGTTCGACA GTCTGGTCAC TCTGCACCCC TGGCAGCGCG ACCCGCTGAC CCTGACTTAT
GTGAGTGCCG GCCTGCAGGC CGGTGCCACC CGTCAGGCCT TGGATTTGCG TGCGACCCTG
CCTGACGGCC AACCCCTGGC GTTGAGCCTG AACAGCCGTA TGTCGGCTGA CGCTTGGCGT
GATGGCGAGG TAGAAGCCTA TGTCAGCCTG CCGCAAAGTG ACTGGGCACA TTGGTTGCCG
CCCAGGGTGT TGGGGCAGTG GCATGCTGAC ACCCTGCGGG CTGGCGGTGA GTTCTGGATC
GGCTGGAGCA AGGGGCAGTT GCAACGGGCC GTCGTAAGGC TCAATGCACC CAGGCTGGAG
GGGGCCTATG CCGGGCGCAA GGCTACCAAC CTGAATAATC TGGCTTTGGG CGCCTGGTTC
CAGCGCCGGG AGCAAGGCTT CGATGTGGTC GTCGACTCGT TGGCCATGGA CCTCGGCAAG
GCCCGCTGGG AGTCTCACCT GCAGTTGCAG CAGCGCCCTG GCCAGAACGC GGCCGATGAA
AGCTGGCAGT TACAGGCCGA CCGCCTCGAC CTCACCCCGC TGACTCCGCT GATCGATGCC
CTGGCCCCCC TGCCGGACAA GGTCAAGGAT GTGGTCGATG GCTTGAAGGT GACCGGTGCG
TTGCGCAATG TGCGCCTCGA GGCCAGGCCC AAGGCCGAGG GTGACCAGCG CCTGCAGTTC
GCAGCCAACC TGGAGAAGGT AGGCTTCGAT GCTTATCACA ACGCCCCGGC GGCCGGTAAC
GTCAGTGGCA GCATCAGTGG TGACCTGGGC CACGGCGAGC TGCGCCTGGA TACCGATGCG
TTCATGCTGC ATCTGTACCC GATCTTCGCC AAGCCCTGGC ATTACCAGAA GGCGAATGCG
CGCTTGACCT GGACCTTGGA CAAAGACGGT TTCACCCTGA TTGCGCCCTA CCTCAAGGTG
CTGGGCGAGG AGGGCAAGAT CGCCGGTGAC TTCCTCATTC GCCTGTTGTT CGAGGAAGGT
CGCGAGGACT ACATGGACCT GCGCGTCGGC CTGACCGAAG GCGATGGCCG CTTTACTGCC
AAGTATCTGC CCGAGGTGCT CAGCCCGGCC CTCGACGAGT GGCTACGCAG CGCTATCGTC
AAAGGCGCTG TGGATGAAGG CTACTTCCAG TATCAGGGCT CGCTGAACCA TGGCGCATCC
CCGCAAGCGC GCAGCATCAG CCTGTTCTTC AAGGTGCATG ACGCCGCGCT GGACTTCCAG
CCCGGTTGGC CACAGGTGCA GCATGTCGAT GGCGATGTGT TCATCGAGGA CAGTGGCGTG
CGCATCAAGG CCCAGCGAGG CGTGCTCCTC GACACCAAGG TCAGCGATGT GAATGTCGAT
ATCCCGCATG TCGACGGTGA CCAGCAAAGC CATCTCTACC TGGATGGCGA CTTCGACGGT
AGCCTGGGTG ATGGCCTGAA GATTCTCAAG GAAGCGCCAA TCGGCACCGG TGAAATTTTC
GCCGGCTGGG AAGGTGAGGG GCCGCTGAAG GGCAAGGTCA AGCTCGATAT CCCGCTGGCC
CATGGGCAGC GCCCAAAGGT GCAGGTGGAC TTCACCACCC ACGATGCGCG CCTGAAAGTG
GCCCCGCCAA GCCTGGAGTT GAACCGCCTG AAGGGCGACT TCAGCTTCGA CTTCGACAAG
GGCCTGAGTG GTAAAGGCAT CAGTCTGCAG GCCTTCGGCA AGCCGGTAAC GGCGCAAATA
ACCGCTGAAG GTCAGGCTGG GCAGATGCAG ACCCGCATCA ATGCCAACGG CCAGGTTTCG
CTCAAGACGC TGACTGACTG GTTGCAGTTC AAGCAAGCCT TGCCGGCCTC CGGTGACCTG
CCCTATCAGT TGCAGCTCAG TCTGGGGAGC CGGGACAACC GCCTGAGTGT CACTTCCAGC
CTCAAGGGGC TGGCCATCGA CCTGCCGGCT CCGTTCGGCA AAGCGGCAGC AGATACCCGT
GACAGCCGTT TCAACATGAG CCTGCAGGGC CCGGAGCGGC AATTCGATGC TGCCTACGCC
GACCTTGCCC GCTTTGCCTA TGCTGCACCG GCTGAAACGT TGACTCAGGG CCGTGGCGAG
CTAGTGCTGG GCACAGGCGA CGCCCGGGTA CCTGCCAGCC AGGGGCTGAG GGTGCGCGGG
CGGCTGGAGA CCCTGGACCT GGCCCCTTGG CAAGAGCAGG CGGGCCGGCT GGCTGGGGAC
GACCCCGGTG GCAGCGCGCG GCAGAACCTG CAAAGCGTCG ACCTGAGCAT CGGCCAGTTG
AAAGCCTTCG GCATGGACCT GAACCAGGCC GTGGTACGCC TGGCCCGGGG CGGCCCGGCC
TGGGATTTGC GCCTCGACAG CAAGGAAGTC ATCGGTAATG CGCGCGTACC GGATGCCAAG
GGCGCGCCCA TGGTCGTGCG CATGCAGACC TTGCGGCTGC CTGCCGCCAG CGCCGCTGAA
CAGCAGGCTG AAGACGGCCC CGACCCGCTT GCCTCGTTCG ATCCGCGCAA AGTCCCGGCA
CTGGACCTGA GCATCGACAA GCTCTATCGC GGTGACGATC TTTACGGCAG CGCCGCGATC
AAGCTGCGGC CGACCCCACG TGGCGTCACA GCCAGTGATA TCGACCTCGA CCTCAAGGGG
TTGCGCATCG ATGGCGGTGG TGGCTGGGAG GGTGAAACGG GCAAAACCAG CAGTTGGTAC
AAAGGGCGCC TTGACGGCAA GAACCTGGCG GATGTGCTCA GCGCCTGGGG CTTTGCCCCG
ACGGTGACCA GCCGCGATTT CCGCCTGGAT GTGGATGGCC GCTGGCCGGG TTCGCCGGCC
GCGGTGGGCC TGAAACGCTT CTCGGGCAGC ATGGATGCAG CACTGCGCAC CGGCCAGTTC
GTCGAGGTCG AAGGCAGCGC ACAGGCGCTG CGGGTGTTCG GCCTGCTCAA CTTCAACTCG
ATTGGCCGGC GCCTGCGTCT GGACTTTTCC GACCTGTTTG ACAAGGGCCT GGCCTATGAC
CGGGTCAAGG GCTTGCTGGT GGCCAGCAGT GGCGTGTACG TGACCCGCGA ACCGATTACC
GTGACCGGCC CGTCGAGCAA CTTCGAGCTC GACGGCACGC TGGACATGGT CAGCGACCGG
GTCGATGCTG ACTTGCAGGT GAGCCTGCCG GTGACCAACA ACCTGCCGCT GGCGGCGTTG
ATCGTCGGCG CGCCGGCGGT GGGCGGTGCG CTGTTCCTGG TCGATCGGCT GATCGGTGAC
CGCGTGTCAC GCTTTGCCAG CGTGCACTAC CGTGTCGAAG GGCCGTGGAA AGAGCCTAGA
ATCACCTTTG TGAAACCTTT CGAGAAATCC CGCTAG
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| Protein sequence | MGRLNRVLVA LTRWGLGICA LLAVLVALYV SLGRELVPLV AEYRADVESK AEQALGMPVH
VGALEGHWSG LAPVLRVRDL QLGEGTKALR LDDVMVVPDI WASLTAREVR LARIQLGGLQ
LILRENEQGA WSLEGLPKKD DAPLDPADLL QRLRQLGRID VFDSLVTLHP WQRDPLTLTY
VSAGLQAGAT RQALDLRATL PDGQPLALSL NSRMSADAWR DGEVEAYVSL PQSDWAHWLP
PRVLGQWHAD TLRAGGEFWI GWSKGQLQRA VVRLNAPRLE GAYAGRKATN LNNLALGAWF
QRREQGFDVV VDSLAMDLGK ARWESHLQLQ QRPGQNAADE SWQLQADRLD LTPLTPLIDA
LAPLPDKVKD VVDGLKVTGA LRNVRLEARP KAEGDQRLQF AANLEKVGFD AYHNAPAAGN
VSGSISGDLG HGELRLDTDA FMLHLYPIFA KPWHYQKANA RLTWTLDKDG FTLIAPYLKV
LGEEGKIAGD FLIRLLFEEG REDYMDLRVG LTEGDGRFTA KYLPEVLSPA LDEWLRSAIV
KGAVDEGYFQ YQGSLNHGAS PQARSISLFF KVHDAALDFQ PGWPQVQHVD GDVFIEDSGV
RIKAQRGVLL DTKVSDVNVD IPHVDGDQQS HLYLDGDFDG SLGDGLKILK EAPIGTGEIF
AGWEGEGPLK GKVKLDIPLA HGQRPKVQVD FTTHDARLKV APPSLELNRL KGDFSFDFDK
GLSGKGISLQ AFGKPVTAQI TAEGQAGQMQ TRINANGQVS LKTLTDWLQF KQALPASGDL
PYQLQLSLGS RDNRLSVTSS LKGLAIDLPA PFGKAAADTR DSRFNMSLQG PERQFDAAYA
DLARFAYAAP AETLTQGRGE LVLGTGDARV PASQGLRVRG RLETLDLAPW QEQAGRLAGD
DPGGSARQNL QSVDLSIGQL KAFGMDLNQA VVRLARGGPA WDLRLDSKEV IGNARVPDAK
GAPMVVRMQT LRLPAASAAE QQAEDGPDPL ASFDPRKVPA LDLSIDKLYR GDDLYGSAAI
KLRPTPRGVT ASDIDLDLKG LRIDGGGGWE GETGKTSSWY KGRLDGKNLA DVLSAWGFAP
TVTSRDFRLD VDGRWPGSPA AVGLKRFSGS MDAALRTGQF VEVEGSAQAL RVFGLLNFNS
IGRRLRLDFS DLFDKGLAYD RVKGLLVASS GVYVTREPIT VTGPSSNFEL DGTLDMVSDR
VDADLQVSLP VTNNLPLAAL IVGAPAVGGA LFLVDRLIGD RVSRFASVHY RVEGPWKEPR
ITFVKPFEKS R
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