| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0861 |
|---|
| Symbol | |
|---|
| ID | 5194655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 982995 |
|---|
| End bp | 983489 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640585319 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001266207 |
|---|
| Protein GI | 148546105 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.37845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGCG CTTTCAAGAC CGTTGCAGCA TTGGCGTTGG GAATAGCCGG TGGCAGCGTT
CATGCACAAG ATATCGTGCG CCATGGCGCA GGTAGTTTCC CTATCTCGTC GGCTGTAGAG
ATTCCTGCCG GGAAGTCGGT CGTCTATCTG AGCGGTTCCG TCCCGTCGGT GATCCATCCC
GATGCGCCCA AGGATTCGCT GGAAGCCTAC GGTGATACCA AGGCACAAAC CATCAATGTG
CTTGAAAGCA TCCAGCAGCA GCTGAAAACG CTGGGTCTTG GCCTGACTGA CGTGGTGAAG
ATGCAGGTTT TCCTGGTGGG TGGGCCGGAG AACGGCGGCA AGATGGATTT CGACGGTTTC
ATGGCTGGCT ACACCCAGTT CTTCGGGCCA GCCGCCAAGC AGCCGGTGCT ACCTGCGCGC
TCGGCGTTCC AGATTGCAGG CCTGGCGCAT CCTGCCTGGC GGGTTGAGAT CGAAGTGACA
GCGGTTCGTC CCTGA
|
|---|
| Protein sequence | MKCAFKTVAA LALGIAGGSV HAQDIVRHGA GSFPISSAVE IPAGKSVVYL SGSVPSVIHP
DAPKDSLEAY GDTKAQTINV LESIQQQLKT LGLGLTDVVK MQVFLVGGPE NGGKMDFDGF
MAGYTQFFGP AAKQPVLPAR SAFQIAGLAH PAWRVEIEVT AVRP
|
|---|
| |