| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0860 |
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| Symbol | |
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| ID | 5194654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 981500 |
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| End bp | 982915 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640585318 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001266206 |
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| Protein GI | 148546104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.300011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATGA CGAGGCGTAA ATTTTTGATC GGCGGCGGCG TCGTGGCTAT TGCAGGTGGC
GCAGGCATTC TGACCCCCTT GCTGACCCGC GAAGGCAGGT TGATCCCCGG CAAACCGCGG
TTTGGTTTTG TAGAAGGTAG CGAAGGTGCG CTTCCCAAAC AGGCAGACGT CGTCGTTGTT
GGCGCTGGTA TTCTGGGGCT CATGACCGCA ATCAATCTTG TCGAGCGTGG CCTCTCGGTA
GTCGTCGTTG AAAAAGGTGA GATTGCCGGC GAGCAGTCAT GCAGGTTCTA TGGTCAGGTC
ATGACCTACA AGATGCCTGA TGCGACGTTC CAGTTGCACC ATCTTGCCAA ACAACGGTGG
CGCGAGATGA ATGCCAAAGT GGGTGCAGAT ACCAGCTATC GCACACAGGG CCGGGTCGAA
GTTCCTTTCG ATGAAGAAGA CCTGGAAAAC GTCAGAAAGT GGATCGATGT CAAAAGCCGG
GAAGTAGCAG CGGACAATCC CTTCAAGACT CGGATCATTC AGGGGAATGA ACTCGAACAG
CGGCTGCGCG GTGCATCCTC AAGCTGGAAA ATTGCAGGTT TAGAGGAAGA CTCCGGTAGC
CTGGACGCCG AGCGCGCATC GTTTGTCATG GCGGAGTACG CCAAGAAAAT GGGTGTGCGC
ATCTACACCC ACTGCGCCGC AAGGGGCCTG GAAACCCAGG CGGGCGTCAT CTCCGATGTG
GTGACCGAGA AGGGCGCCAT CAGGACTTCT CGCGTGGTCG TGGCAGGCGG CGCCTGGTCC
AGGCTGTTCA TGCAGAACCT GGGCGTCGAT GTGCCTACCT TGCCGGCCTA CCAGTCCCAG
CAAATCATCA GCGCGGCGCC CCGTGCACCG GGGGGCAACG TTGCATTGCC AGGGAATATC
TACTTCCGTG AGCAGGCCGA CGGTACATAC GCCACCTCGC CGCGCGTCGT CGTTGCCCCG
GTGGTCAAAG AATCGTTCAT GTATGGTTAT AAATACCTGC CATTGCTGGC CATCCCCGAC
TTCCCGGTGC ACATCTCACT CAACAAGCAA CTGATCGATT CGTTCACTCA GCCCACCCAG
TGGAGGCTGG ACGAGGTATC GCCCTTCGAG AAAAACAGGC TGATGACGGC GGCCCCGGAT
ATTCCAGAGC TGGATGCATC TCTGGAAAAG CTCAAAGTCG AGTTCCCTGC CTTCAAAGAT
GCGAAGTTGA TCGATCAGTG GAGCGGTGCC ATGGCCATCG CCCCGGATGA GAACCCGATC
ATTTCGCAGG TCAACGAGTA CCCAGGCCTG GTCATCAACA CCGCGACCGG TTGGGGTATG
ACGGAAAGCC CGGTGTCGTC CGAGCTGACG GCAGACCTGC TGCTTGGAAA GGCGCCGGTG
CTGGACCCGA AACCCTTCAG TTTGTATCGA TTCTAA
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| Protein sequence | MGMTRRKFLI GGGVVAIAGG AGILTPLLTR EGRLIPGKPR FGFVEGSEGA LPKQADVVVV
GAGILGLMTA INLVERGLSV VVVEKGEIAG EQSCRFYGQV MTYKMPDATF QLHHLAKQRW
REMNAKVGAD TSYRTQGRVE VPFDEEDLEN VRKWIDVKSR EVAADNPFKT RIIQGNELEQ
RLRGASSSWK IAGLEEDSGS LDAERASFVM AEYAKKMGVR IYTHCAARGL ETQAGVISDV
VTEKGAIRTS RVVVAGGAWS RLFMQNLGVD VPTLPAYQSQ QIISAAPRAP GGNVALPGNI
YFREQADGTY ATSPRVVVAP VVKESFMYGY KYLPLLAIPD FPVHISLNKQ LIDSFTQPTQ
WRLDEVSPFE KNRLMTAAPD IPELDASLEK LKVEFPAFKD AKLIDQWSGA MAIAPDENPI
ISQVNEYPGL VINTATGWGM TESPVSSELT ADLLLGKAPV LDPKPFSLYR F
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