| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0805 |
|---|
| Symbol | |
|---|
| ID | 5195347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 900069 |
|---|
| End bp | 901406 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640585265 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266153 |
|---|
| Protein GI | 148546051 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.14541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0747184 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCTGG ATTACCTCGT GCCCTCCTGG CACGAGATCG AGTCACGTGT CATCGCCATG
GTGGGCTACC CAAGCGGTGG CCAGTTCCGC ACCAGCCTCA ATGAAGAGGT CGCCTCACTG
GGCCTCAACC TGCGCCGGAT CGAAGCTGTC CGCACAGCCT TCTACCACGC CGAATGGCAG
GCGGCGCACC TGCTACGCCA GCGCTTCGCC GACCTCGACA TCAACAGCAT CGTCGACGAA
CTGCTGAGGG TCGTGCAGCA GATGGCGATG ATCGTCGTCG GCAGCACCGT TACCGGTGGC
CTGCTTGGCG CAGGGGTCGG CGCATTCGCC GGCGGCGCCG GAACCATTCC GTTCGCCGGC
GCAGGCGCGG CCATGGGCCT TAAGGTCAGT GGTTGGATCC TTGGCGCGCT GGGGCTGGCT
TCCATTGCCG AGTTCTTCAT CGAGGGCTTG CCGCGTATCG GCGAGTACTA CGTCGATGGC
ATCCGCTTCG CCTGGGAAGG CACCTGCGGC AATGAAGGCA CCGGCCCGTT CTGCCGGGAC
GACCCCTATG CGATATCCCG GGCCACGCAT CAGATTGCCC AAGGCCATGT GGAAGTCGTG
GTGCTGTTGT TGGGGGCAAT TGTGTCGTAC CTCACCCGCG GGCGCGGCGA TGCCCGGGTG
CTGGCCCAGG AAATGGCGGC CAGCCGCAAA GGCGCGCGGC TGGGGCAATG GATGCTCCAG
CATGAAGAGG GGTTGAAGAA ACGGCCGGAT CTGCAGGTGC CGGAGCGGCG CAAGGGGGCG
ATGGATGATC CGCAGCCCGT TAGCCCGAAT CAGCCCAGGA AAGCACCAAC AAAGACCCAT
CCGGGCGCGA TGGCATTGCA TAACGTTGAA TGTTTCAAAG CTGATAAAGT ACCGGAATAC
AAAATAGGCG AATTCAAACG ACAGTTGAAT GGCCAGGAAG ACGGGCTCAA CTGGATGACC
GTTGAAGAAT TTTTGGAAAA AGTTGAAAAC CCAAATCAGC GCAATAAAGG GCTCGCCCAG
AGAGCGAGAA AAAAGGAGCA AGAATTTATC AAGGAAAAAA TTGAAAAAGA GCTCAGGAAA
ACCATGGGCC CATTTGAAGC GCAACGGGTT GCAATAGAAA AAGCCAGAAA CCGGATGTCA
ATTACAGCAG CACTGCACAA TCCGGATCTC GTCGCCGGAG GTAGAGACGT CATATCGGAC
TTTGGGGACC GCCAGGTAAA CTCAGTGATA GGCGCCCAAT GGAAAACCAG GATACCCAAC
TTAAAGAAAG CGGCCGAAAG GGTATCCCTG GAGTCCAGAG GCTCAATCCG CATGAATGTC
AAATTACATA AGTGCTAA
|
|---|
| Protein sequence | MYLDYLVPSW HEIESRVIAM VGYPSGGQFR TSLNEEVASL GLNLRRIEAV RTAFYHAEWQ
AAHLLRQRFA DLDINSIVDE LLRVVQQMAM IVVGSTVTGG LLGAGVGAFA GGAGTIPFAG
AGAAMGLKVS GWILGALGLA SIAEFFIEGL PRIGEYYVDG IRFAWEGTCG NEGTGPFCRD
DPYAISRATH QIAQGHVEVV VLLLGAIVSY LTRGRGDARV LAQEMAASRK GARLGQWMLQ
HEEGLKKRPD LQVPERRKGA MDDPQPVSPN QPRKAPTKTH PGAMALHNVE CFKADKVPEY
KIGEFKRQLN GQEDGLNWMT VEEFLEKVEN PNQRNKGLAQ RARKKEQEFI KEKIEKELRK
TMGPFEAQRV AIEKARNRMS ITAALHNPDL VAGGRDVISD FGDRQVNSVI GAQWKTRIPN
LKKAAERVSL ESRGSIRMNV KLHKC
|
|---|
| |