Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0657 |
Symbol | |
ID | 5193717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 741933 |
End bp | 742952 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640585112 |
Product | inner-membrane translocator |
Protein accession | YP_001266009 |
Protein GI | 148545907 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.558006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.165436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA AAAACCCATT GCCAGTCGCC AAGGGCCGCG CCCCGGCGCT GCTGTCGCTG GTAGTTGCCA GCCTGGTGGC GCTGCCGCTG TTGCTGCCCT CGGCCACCCT GGCCACCGAG ATCCTGATCT TTGCCATGGC CGCACTGGCC TGCAACCTGC TACTCGGCTA CACCGGACTG CTGTCGTTCG GCCAGGGCAT CTTCTTTGGC GTGGGCGCCT ATGGCGCAGC GCTGCTGATG ATCCACCTGC AGTGGGGCAT GTTCGCCGCG CTGCTTGGCG CAGCTGTGTT CGGCGCCTTC CTCGCGCTGC TGGTGGGCGC ACTGGCAATT CGGCGTACGG GCATCTACTT CGTCATGCTG ACCCTGGCCT TCAGCCAGAT GGCCTACTTC CTGGCCTATA CCCTCAGCGG CTGGACCGGC GGTGACAACG GCCTGCTTGA TGTGCCACGG CCGAATATCG AAATCGCCGG CCATGTGCTG GTCGACCTGG CCGACCCACG GCACTTTTAT GTGTTCGTCG CGGTGCTGTT CCTGTTGATC TTCGCCGCAG CCCTGCGGGT GATCCGTTCG CCATTCGGCA GCACCCTGCT GGCTATCCGT GAGAACGAGA CCCGCGCCGC CGCCATCGGC TACGACACCC GCCATTTCAA GATTCTGGTG TTCATGCTGT CGGGCGCCAT CACCGGCATC GCCGGGGCGC TGTACGCCAT GCTGCTGCAC TTTGCGCCGC TGTCGAACAT CGACCTGATG ATGAGCGAGA ACATCCTGAT CATGACCATC GTCGGCGGCA CCGGCTCACT GTTCGGCTCG CTGCTGGGGG CCGGCGCCAT CGTGCTGCTG GGTGACGTGC TGTCGGAACT TTGGCCACGC TGGCTGATGC TGCTGGGGGT GATCCTGATT CTGGTGGTGG TGTTCATGCG TGGCGGCCTG TGGGGTGGCC TGACCGAACT GGGCAAGCGC CTGCTGGCCA CCCGCAATGC CGATGACAAA CCCCAGGCCA AGACCAAGGA GACCCTGTGA
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Protein sequence | MSEKNPLPVA KGRAPALLSL VVASLVALPL LLPSATLATE ILIFAMAALA CNLLLGYTGL LSFGQGIFFG VGAYGAALLM IHLQWGMFAA LLGAAVFGAF LALLVGALAI RRTGIYFVML TLAFSQMAYF LAYTLSGWTG GDNGLLDVPR PNIEIAGHVL VDLADPRHFY VFVAVLFLLI FAAALRVIRS PFGSTLLAIR ENETRAAAIG YDTRHFKILV FMLSGAITGI AGALYAMLLH FAPLSNIDLM MSENILIMTI VGGTGSLFGS LLGAGAIVLL GDVLSELWPR WLMLLGVILI LVVVFMRGGL WGGLTELGKR LLATRNADDK PQAKTKETL
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