| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0651 |
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| Symbol | |
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| ID | 5191793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 735998 |
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| End bp | 736387 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585106 |
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| Product | type IV pili biogenesis protein PilE |
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| Protein accession | YP_001266003 |
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| Protein GI | 148545901 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.384502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAG GCTTGAGCCT GATCGAGTTG TTGATTGTGC TGGCCGTGAC CGGCATTCTG
GCAGCCATTG CCTACCCCAG TTACAGCGAC CAGCTTCGGC GAGCCGCGCG CAGCGAAGTG
GTTGGCCTGC TGCATGATGC CGCCCTGCGC CTGGAGCGCC ACCGCGTGCG CACTGGCCAA
TACGCCGAGG GCGACCTGGT CTTGCCCGAA GGTACCCGCT ACTACAGCCT TCAGGCCCAG
CGCGACAGTG ACACCTTCAC GCTGCGCGCC CGGCGGCTAC CGCATGGGCT GATGGCGCAG
GATGGCTGTG GCGATTTCCA GCTCGACCAG GCTGGCATGC AGCGCAATCC GGGTGCCGTT
GAGCACAGCA CGCACTGCTG GGGAAGCTGA
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| Protein sequence | MQQGLSLIEL LIVLAVTGIL AAIAYPSYSD QLRRAARSEV VGLLHDAALR LERHRVRTGQ
YAEGDLVLPE GTRYYSLQAQ RDSDTFTLRA RRLPHGLMAQ DGCGDFQLDQ AGMQRNPGAV
EHSTHCWGS
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