| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0649 |
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| Symbol | |
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| ID | 5192227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 734897 |
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| End bp | 735535 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585104 |
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| Product | hypothetical protein |
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| Protein accession | YP_001266001 |
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| Protein GI | 148545899 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.381902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGCT GTCAGGCAGG GTTTGGCTTG CTTGAGATGG TGGTGGCGCT GGCGATCGGA
TTGATGCTGC TGGCGGCGGC CAGCCAGCTT TTTGTCTCCG CGCACCAGAC TTGGCGCCTG
CAAAGTACGG CAGTGCGCAT GCAGGATTCT GCGCGGCTTG CATTGCTGCG CATGGCGCAG
GATATCCGCA TGGCCGGGAT GTTCGGTTGC CTGCGCCTGA CCCCAGACGA CTTTCTGGTC
TCCGGCGCGG AGCAGGCCTT TACCCGGCCC TTGGCGAGCG GCCCGTCAAG TTTGAGCCTG
GTCGTCGCTG AGTTACCAGG GTATGCCGGC GACCCCGACT GGACCTTGCT GACAAACTGT
ATCAACACGG TGGAGGTACA CAAGGAGCGC GCGCAAGGTA GCGACACGCT TATGGCTGTG
CCTGTCAGCC GGCATCGCTA TGCTCACGTT GGAAGTACGC TTTACTTCGA GCGGCGCGGC
CGCAATCAGC CCTTGGTCGA TCACGTGCGC GAACTGCGTG TGGTGCAGGT GGCTGGAGAG
CGGATCGATC TTCAGCTGAC ATTGTATGAG CCGACCTTGC AGCTTGAGCA GCACCATACG
CTGAGCGTGG CATTGCGTAA CCCGGTGCCG GCTTCATGA
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| Protein sequence | MRRCQAGFGL LEMVVALAIG LMLLAAASQL FVSAHQTWRL QSTAVRMQDS ARLALLRMAQ
DIRMAGMFGC LRLTPDDFLV SGAEQAFTRP LASGPSSLSL VVAELPGYAG DPDWTLLTNC
INTVEVHKER AQGSDTLMAV PVSRHRYAHV GSTLYFERRG RNQPLVDHVR ELRVVQVAGE
RIDLQLTLYE PTLQLEQHHT LSVALRNPVP AS
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