| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0539 |
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| Symbol | |
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| ID | 5191285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 608491 |
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| End bp | 609174 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584991 |
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| Product | OmpW family protein |
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| Protein accession | YP_001265891 |
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| Protein GI | 148545789 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.870065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGT CCTTGCTGGG TGCCTCGCTT GTGGCCCTTG CGCTCGCCGC CCCTGCCGCC
CACGCCTATC AGGCGGGGGA CATGATCCTG CGCGCAGGCG CCATCACCAC CGCCCCGAAC
GAGAGCAGCG GCGACCTCAA GTTTGACGGT AACAAGGTGT CGGGCACCAA GGCGACCCTG
GACAGCGATA CCCAGTTGGG CCTGACCTTT GCCTACATGC TCACCGACCA CATCGGCCTG
GAGCTGCTGG CAGCTACCCC GTTCAAGCAC ACCGTCGCCG TAAAAGGCCT GGGCGGCGGG
CTGGACGGCA AGCTGGCAGA CATCAAGCAA CTGCCACCGA CGCTGTCGCT GCAGTACTAC
CCAATGGAAC CGAATTCGCG CTTCCAGCCG TACGCTGGCG TCGGTATCAA CTACACCCTG
TTCTTTGACG AAGACTTGAG CAGCGCACGC AAGCAACAAG GCTTCAGCAA CCTCAAGCTG
CAGGATTCGG TAGGTATCGC CGGCCAACTG GGCATGGACT ACTTGCTGAC CGACAACCTG
CTGGTAAACG CCTCGGTCTG GTACGTCGAC ATCGACACCA AGGCCAGCGT CAACGGCCCG
ACCGCCCTTG GCTACAGCAA GACCAAGGTC AACGTCGACG TCGACCCATG GGTATACATG
GTCGGCCTTG GCTACAAGTT CTGA
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| Protein sequence | MNKSLLGASL VALALAAPAA HAYQAGDMIL RAGAITTAPN ESSGDLKFDG NKVSGTKATL
DSDTQLGLTF AYMLTDHIGL ELLAATPFKH TVAVKGLGGG LDGKLADIKQ LPPTLSLQYY
PMEPNSRFQP YAGVGINYTL FFDEDLSSAR KQQGFSNLKL QDSVGIAGQL GMDYLLTDNL
LVNASVWYVD IDTKASVNGP TALGYSKTKV NVDVDPWVYM VGLGYKF
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