| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0470 |
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| Symbol | |
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| ID | 5192887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 545178 |
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| End bp | 546137 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640584919 |
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| Product | biotin--protein ligase |
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| Protein accession | YP_001265824 |
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| Protein GI | 148545722 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0969933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0169671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGT TGTTGAATCT CCTCAAGGAC GGTCGGTTCC ATTCCGGAGA AGCTCTGGGG
GCAGCCCTAG GGGTGAGTCG CAGCGCAGTT TGGAAGCAGC TGCAGCATCT GGAAAGTGAG
CTGAACCTCA CCATTCACAA GGTTCGTGGG CGCGGTTACC AGTTGGCCGC GCCACTGGCT
TTGCTTGAGG CGCAGGCAAT CGCCGAGTTC GCCGTGGGCG AACAGTGGCC GGTATTCATC
CACGAAACCA TCGATTCGAC CAATGCCGAA GGCTTGCGCC TTGCCAGTGA AGGGCAGGCG
GCTCCATTCC TGGTTCTGGC TGAGCGCCAG AGCGCCGGAC GCGGTCGGCG CGGCCGGCAG
TGGGTCAGCC CATTTGCTGA AAATCTCTAT TACAGCCTGG TGCTGCGCGT CGATGGAGGC
ATGCGTCAGC TCGAGGGGTT GAGCTTGGTA GTGGGGTTGG CGGTAATGCG CACCTTGCAG
GCGTTCGGTG TAAAGGATGT CGGGCTCAAA TGGCCCAACG ATGTGCTGGT GCGTGGGCAG
AAAATCACCG GGATTCTCCT GGAGTTGGTG GGTGATCCTG CAGATGTCTG TCATGTGGTG
CTAGGCATTG GTATCAATGT AAACATGCAG GTAAACGAAC AGGTCGATCA GCAGTGGACC
TCCATGCGGC GTGAGGTTGG TGCAGCCATA GATCGCAATC ACTTGGTAGC GCTGCTCAGT
CAGCAGCTAC AGCACGAATT GGCGCGCCAT CGCCGCTACG GCTTTGCTGC ATTCCAGGAA
GAGTGGGAGC AGGCGCACTT GTGGCAGGGG CGCAATGTAT CGCTGGTTGC TGGTAGTACA
CGTATTGATG GCGTGGTTCT TGGCGTCGAC GGGCAGGGTG GTTTGCGCCT TGAGGTGGAC
GGGATGGAAA AGAGCTTCAG TGGTGGTGAG CTCAGTTTGA GGTTGCGTGA TGATTCTTGA
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| Protein sequence | MLKLLNLLKD GRFHSGEALG AALGVSRSAV WKQLQHLESE LNLTIHKVRG RGYQLAAPLA
LLEAQAIAEF AVGEQWPVFI HETIDSTNAE GLRLASEGQA APFLVLAERQ SAGRGRRGRQ
WVSPFAENLY YSLVLRVDGG MRQLEGLSLV VGLAVMRTLQ AFGVKDVGLK WPNDVLVRGQ
KITGILLELV GDPADVCHVV LGIGINVNMQ VNEQVDQQWT SMRREVGAAI DRNHLVALLS
QQLQHELARH RRYGFAAFQE EWEQAHLWQG RNVSLVAGST RIDGVVLGVD GQGGLRLEVD
GMEKSFSGGE LSLRLRDDS
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