| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0430 |
|---|
| Symbol | |
|---|
| ID | 5191290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 496120 |
|---|
| End bp | 497391 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640584874 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265784 |
|---|
| Protein GI | 148545682 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2718] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.220471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACG TTATAGACCG ACGCCTGAAC GGCAAGAACA AGAGCACGGT CAACCGCCAG
CGCTTCCTGC GGCGGTACCG CGAACACATC AAGAAGGCCG TCGAAGAGGC GGTGAGCCGC
CGTTCCATCA TGGATATGGA ACACGGCGAG CAGATCAGTA TTCCCGGGCG CGACATCGAC
GAACCCGTCT TGCATCATGG TCGCGGGGGC AAACAGACCA TCGTGCATCC TGGCAACAAA
GAGTTCACTG CCGGTGAACA CATCCCACGG CCGCAAGGCG GTGGAGGCGG TGGCGGTCGC
GGCAAGGCCG GCAATTCCGG CGAGGGCATG GACGAGTTCG TCTTCCAGAT CACCCAGGAA
GAATTTCTCG AATTCATGTT CGAAGACCTT GAGCTACCCA ACCTGGTCAA ACGTCACCTG
ACTGGCGCCG ATACCTTCAA GACTGTTCGC GCCGGCATCG CCAACGAAGG CAACCCGTCA
CGCATCAACA TCGTGCGCAC CCTGCGCTCG GCCCATGCCC GGCGTATCGC CCTGACCGGC
AGCAGCCGCG CCCTGCTGCG CGAAGCACAA AAGGAACTCG ATCGCCTGCG GGTCGAAGAG
CCAGACAATT TCACCGATAT CCAGGAAGTC GAACAGGAAA TCGAGCGCCT GAAGGCACGT
ATCAACCGCC TGCCCTTCCT CGACACCTTC GACCTCAAGT ACAACCTGCT GGTCAAGCAA
CCCAACCCCA GCTCGAAGGC AGTGATGTTC TGCCTGATGG ACGTATCCGG CTCGATGACC
CAGGCCACCA AGGACATCGC AAAGCGCTTC TTCATCCTGC TGTACCTGTT CCTCAAGCGT
AACTACGAGC GCATCGAAGT CGTGTTCATT CGCCACCACA CCAGTGCTCG GGAAGTCGAT
GAAGAAGAGT TCTTCTACTC GCGGGAAACC GGCGGCACCA TCGTCTCCAG TGCCCTCAAG
CTGATGCAGG AGATCATGGC CGAGCGTTAC CCGGCCAGCG ACTGGAACAT CTATGCCGCG
CAGGCTTCTG ATGGCGACAA CTGGAACGAC GACTCGCCCA TCTGCCGCGA CATCCTCTCC
AAACAGATCA TGCCGCATGT GCAGTACTAC ACTTACGTTG AGATCACCCC CCGTGAACAC
CAGGCGCTGT GGTATGAATA CGAGCGTATC GGAGATGCTT TCCCCGACAC GTTCGCCCAG
CAGCAGTTGG TATCGGCCGG CGATATCTAC CCGGTCTTCC GTGAACTCTT CCAGCGCAGG
TTAGCCACAT GA
|
|---|
| Protein sequence | MSYVIDRRLN GKNKSTVNRQ RFLRRYREHI KKAVEEAVSR RSIMDMEHGE QISIPGRDID
EPVLHHGRGG KQTIVHPGNK EFTAGEHIPR PQGGGGGGGR GKAGNSGEGM DEFVFQITQE
EFLEFMFEDL ELPNLVKRHL TGADTFKTVR AGIANEGNPS RINIVRTLRS AHARRIALTG
SSRALLREAQ KELDRLRVEE PDNFTDIQEV EQEIERLKAR INRLPFLDTF DLKYNLLVKQ
PNPSSKAVMF CLMDVSGSMT QATKDIAKRF FILLYLFLKR NYERIEVVFI RHHTSAREVD
EEEFFYSRET GGTIVSSALK LMQEIMAERY PASDWNIYAA QASDGDNWND DSPICRDILS
KQIMPHVQYY TYVEITPREH QALWYEYERI GDAFPDTFAQ QQLVSAGDIY PVFRELFQRR
LAT
|
|---|
| |