Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0290 |
Symbol | |
ID | 5191216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 336593 |
End bp | 337069 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640584735 |
Product | hypothetical protein |
Protein accession | YP_001265648 |
Protein GI | 148545546 |
COG category | [S] Function unknown |
COG ID | [COG4680] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0015092 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.362406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGGGCA TCAATCCATT GGCGATCGCC AGGTCACCGT ACATCTCGCA TCCAGATATC TGGTTGACAG ATATCTGGAT CAGAGATATT TTCCACCCTA TGTTGGTGCG CCGGGACAAC ACAATGCGGG TCATAACGAA AGCGGCGGTA ACCAAGGCGA TTGAAGCCCA CGGCCAGTGG AAAGCGCCCC TAAGCCTGTG GCTGACGACC TTCGACAGGG CGACGCTGCG GTTTGAATCT TTTGAACAGT TGAGGCAGAC GTGGGTCACT GTGTCTGGCT GGAATGTTGA TCGCATCCCC CACTCAAAAC TTAGGCCCGC CAGCCGCAAA GGGCCGCTTG ATATCTACGT GTTCGATATC AAGAAAAACG AATGCCGCCT GATCGCGTGG CTCAATGCGC GAACGGGCAC TCTCTACATC AAGGCCATTC TGTCGCACGC CGAGTACGAC AAATGGTGCA GAAGCGATAT CAGGTAG
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Protein sequence | MTGINPLAIA RSPYISHPDI WLTDIWIRDI FHPMLVRRDN TMRVITKAAV TKAIEAHGQW KAPLSLWLTT FDRATLRFES FEQLRQTWVT VSGWNVDRIP HSKLRPASRK GPLDIYVFDI KKNECRLIAW LNARTGTLYI KAILSHAEYD KWCRSDIR
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