| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0278 |
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| Symbol | |
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| ID | 5191218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 320072 |
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| End bp | 321478 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584723 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001265636 |
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| Protein GI | 148545534 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG AGACACTGAT CGACAGCCGA GCCCAGGTCA TCCTGGTCGA CGATGACCCC
CACCTGCGCC AAGCCTTGAG CCAGACCCTG GACCTGGCCG GGCTCAAGGT AGTCGCCCTG
CCCGAAGCCC AAGGCCTGGC CGACCGTATC GAGGCCGACT GGCCAGGCGT GGTGGTCAGC
GACATCCGCA TGCCGGGCAT CGATGGCCTG CAGTTGCTGG AACAACTGCA CGGCCGCGAC
AGCGAACTGC CGGTGCTGCT GATAACCGGC CATGGCGATG TGCCGCTGGC GGTGCAGGCG
ATGCGTGCCG GGGCTTATGA CTTCCTGGAA AAACCCTTTG CCACAGACGC CCTGCTCGAC
AGCGTACGCC GCGCCCTGGC CTTGCGCCGA CTGGTGCTGG ACAACCGTAG CCTGCGCCTG
GCACTGAGCG ACCGCCAGCA ACTGGCAACC CGCCTGGTCG GCCATTCACC GGCCATGCTG
CGCCTGCGCG AGCAGATCGG CGCCTTGGCC GGCACCCGCG CCGACGTGTT GATTCTAGGC
GAAACCGGCG CCGGCAAAGA GGTGGTGGCT CGCGCATTAC ATGACCTTTC CAGCCGCAGC
GAAGGGCCGT TCGTGGCGAT CAACGCCGGC GCGCTGGCCG AGTCGGTGGT CGAAAGCGAA
CTGTTCGGCC ACGAGCCCGG TGCGTTCACC GGCGCGCAGA AGCGCCGTAT CGGCAAGTTC
GAATTTGCCA ACGGCGGCAC GCTGTTCCTC GACGAAATCG AGAGCATGAG CCTGGATGTA
CAGGTGAAGC TACTGCGCAT GCTGCAGGAG CGGGTGGTCG AACGCCTGGG CGGCAACCAG
TTGATCCCGC TGGACATCCG CATCATAGCC GCCACCAAGG AAGACCTGCG TCAGGCTGCC
GACCAAGGGC GTTTCCGCGC GGACTTGTAT TACCGCCTGA ACGTGGCGCC GCTGCGTATT
CCGCCACTGC GTGAACGCGG CGACGACATA TTGGTGTTGT TCCAGCATTT CGCCGATGCT
GCCAGCCAAC GTCATGGCCT GTCGCCGCAT GCGCTGCAAC CCGCGCAACG CGCCCTGCTG
CTGCGTCATG ACTGGCCAGG CAACGTCCGC GAGCTACAGA ACGCCGCCGA GCGTTTCGCC
CTTGGCCTGG AACTGGCACT CGATGGCCAG GCACCCTCGG CAGCAGCGCC GGCAGCGCCC
ATGCTCAGCG GCAACCTCAG CGAACAGGTC GAGCAGTTCG AACGTTCGCT GATCGCCGCC
GAACTGGCCC AGCCACACGG TTCCATGCGG AGCCTGGCCG AAGCACTGGG TATCCCCCGC
AAAACCTTGC ACGACAAGCT GCGCAAGCAT GGCTTGAACT TCGACGGCGG CAGCGGCGGG
CATGACGATC AAGAGGACAA CCGTTAA
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| Protein sequence | MTTETLIDSR AQVILVDDDP HLRQALSQTL DLAGLKVVAL PEAQGLADRI EADWPGVVVS
DIRMPGIDGL QLLEQLHGRD SELPVLLITG HGDVPLAVQA MRAGAYDFLE KPFATDALLD
SVRRALALRR LVLDNRSLRL ALSDRQQLAT RLVGHSPAML RLREQIGALA GTRADVLILG
ETGAGKEVVA RALHDLSSRS EGPFVAINAG ALAESVVESE LFGHEPGAFT GAQKRRIGKF
EFANGGTLFL DEIESMSLDV QVKLLRMLQE RVVERLGGNQ LIPLDIRIIA ATKEDLRQAA
DQGRFRADLY YRLNVAPLRI PPLRERGDDI LVLFQHFADA ASQRHGLSPH ALQPAQRALL
LRHDWPGNVR ELQNAAERFA LGLELALDGQ APSAAAPAAP MLSGNLSEQV EQFERSLIAA
ELAQPHGSMR SLAEALGIPR KTLHDKLRKH GLNFDGGSGG HDDQEDNR
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