Gene Pput_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0216 
Symbol 
ID5191594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp255779 
End bp256258 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID640584661 
Producthypothetical protein 
Protein accessionYP_001265575 
Protein GI148545473 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.851915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCG ACCTGTGGAA TTACGCCCTG ACCCTGTATA CCAGGCCCGG CGTGGAAGCC 
GCTTGCCTTG AACTGCAGGC ACTGGGTGGC GATGTCTGCC TGCTGCTGTG CGCGACCTGG
CTGCAAGCAC GTGGTGTGGC CGTACTGGGC GAACGTGCGC AAGCACTGCA AGAACTTGCC
GAGCCCTGGC AGCGTGACGT GGTCGCCCCG CTGCGCAGCC TGCGCCAGCA ATGGCGAGCC
ACAGCATCGG GTGATACACA ACTGGCGGCA TTACGTGAGC AGGTGAAGGG GTTGGAGTTG
CAGGCTGAAA AAGCCTTGCT GGAGCGCTTG CAGGAACGCT CGCAACAGTG GCCCGTGGGC
TCCCATGAGC CCGCGGACGA CTGGCTGGCC CGGCTGGCAC CGGACCAGGC TCTGCATCAT
GACGCGCTAG TTCAGTTGCG CGTCGCAGCG GCTGCGCTTC AGGACGCCGA AGGTGCCTGA
 
Protein sequence
MHTDLWNYAL TLYTRPGVEA ACLELQALGG DVCLLLCATW LQARGVAVLG ERAQALQELA 
EPWQRDVVAP LRSLRQQWRA TASGDTQLAA LREQVKGLEL QAEKALLERL QERSQQWPVG
SHEPADDWLA RLAPDQALHH DALVQLRVAA AALQDAEGA