Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0196 |
Symbol | |
ID | 5191109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 236174 |
End bp | 236626 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640584641 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001265555 |
Protein GI | 148545453 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.149236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTTG ATTTCCTGCG CCTGCAAGTC AGCAGTGGCC TGGTAGTTGC TGCCCGCCAC TGGCGGCGCA TCTGTCATAC CGCCTTGACC GGCTACGGCA TTTCCGAGGC CTGCGCTGCG CCGTTGCTGA TGATCGTGCG CCTGGGCGAC GGCGTGCACC AGGTGGCTGT GGCCCAGGCC GCTGGCCTGG AAAGCCCGTC GCTGGTACGC CTGCTTGACC AACTGTGCAA AGCTGGCCTG GTGTGCCGCA GCGAGGACCC ACTGGATCGC CGCGCCAAGG CACTGAGCCT GACTGCCGAA GGCCGTGCCC TGGCCGAAGC CATTGAAGCC GAACTGGTGC GCTTGCGCCG CGATGTGCTC GGCGGTATCG ATCAGGCCGA CCTGGAAGCT GCCTTGCGTG TGCTTCGTGC CTTCGAGGCT GCCGGTCTGG GCAGCGCAGG CGGGGTGGCA TGA
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Protein sequence | MSLDFLRLQV SSGLVVAARH WRRICHTALT GYGISEACAA PLLMIVRLGD GVHQVAVAQA AGLESPSLVR LLDQLCKAGL VCRSEDPLDR RAKALSLTAE GRALAEAIEA ELVRLRRDVL GGIDQADLEA ALRVLRAFEA AGLGSAGGVA
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