Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0099 |
Symbol | |
ID | 5193784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 105300 |
End bp | 106196 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640584540 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001265458 |
Protein GI | 148545356 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCACG ACCTCCCTCC CCTCAATGCC CTGCGCGCCT TCGAGGCTGC AGCCAGGCTC AACAGCGTCA GCCAGGCGGC GGAAGCGCTG CACGTGACCC ACGGCGCTGT CAGCCGGCAG ATCAAGGTGC TTGAGGAGCA TCTGGGCGTA GCCCTGTTCG TCAAGGACGG GCGTGGCATC AAACTCACAG ATGCCGGTGT GCGTCTGCGC GATGCCAGCG GTGAGGCCTT CGACCGGCTG CGCAGCGTGT GTTCCGAGCT CAGCCGTGAT GTGAGCGAGG CGCCATTCGT GCTGGGCTGC TCGGGCAGCC TGCTGGCGCG GTGGTTTATC CCGCGGCTGG GGCGGTTGCA GGCGGATTTA CCTGAGCTGC GCTTGCACCT GTCGGCGGGT GAGGGTGACC TTGACCCGCG GCGGCCCGGG CTGGATGCGT TGCTGGTGTA TGCCGAGCCA CCGTGGCCTG CGGACATGCA GGTGCACGTG CTGGCCGAAG AATGCATCGG GCCGGTGCTC AGCCCACATT TCGCAGGTTT CCAGCGCTTG CAGGGGGCGC CCGCCAAGGC ATTGTTGGGC GAAGCCTTGC TGCACACCAC TTCACGCCCG CAAGCGTGGC CAACCTGGGC GGTGCAACAG GGCCTGGACC CGACGGCCAT TCACTATGGC CAGGCTTTCG AGCACCTGTA TTACCTGCTG GAGGCTGCCG TGGCCGGATT GGGCGTGGCG ATTGCACCGC AGCCACTGGT CGCCGATGAC CTGCGGGCGG GCCGTTTGAG TGCGCCTTGG GGCTTTTCAC CTACCCAGGC GGCGCTGGCA CTGTGGGTGC CACGGCGCGC CGCAGACGGG CGCGCCGAGC AGTTGGCGCA GTGGTTACGG GCGGAACTTG CGCGGCAGAG CGCTTAG
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Protein sequence | MAHDLPPLNA LRAFEAAARL NSVSQAAEAL HVTHGAVSRQ IKVLEEHLGV ALFVKDGRGI KLTDAGVRLR DASGEAFDRL RSVCSELSRD VSEAPFVLGC SGSLLARWFI PRLGRLQADL PELRLHLSAG EGDLDPRRPG LDALLVYAEP PWPADMQVHV LAEECIGPVL SPHFAGFQRL QGAPAKALLG EALLHTTSRP QAWPTWAVQQ GLDPTAIHYG QAFEHLYYLL EAAVAGLGVA IAPQPLVADD LRAGRLSAPW GFSPTQAALA LWVPRRAADG RAEQLAQWLR AELARQSA
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