Gene Swit_4878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4878 
Symbol 
ID5196921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5375429 
End bp5376178 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID640584435 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001265353 
Protein GI148557771 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA CCGACGAACA GCTCGACCGC TACGCGCGCC ACATCATCCT CAAGGAGATC 
GGCGGCGCGG GGCAGCAGGC GTTGCTGAAG GCGACGGTGG CGGTGATCGG CGCGGGCGGG
ATCGGGTCGC CCGCGATCCA ATATCTGGCG GCGGCCGGGA TCGGCCTGTT GCGCGTCATC
GACGACGACG TCGTCGACCT GTCCAACCTG CAGCGCCAGA CCTTGTTCGG CACCGCCGAC
ATCGGCTGCC CCAAGGCCGA GGTCGCCGCC GCGCGGGTGG CGGCAATGAA CCCCGACGTG
CTCGTCGAGC CGGTGACGGT GCGGATCGAC GCGGACACCG CCGACGATCT GCTGGAGGGC
GCCGACCTGG TCCTCGACGG CTGCGACAAT TTCGCGACCC GCCTCGCCGT CTCCGACGCC
GCGACCCGGC TCGGCATCCC GCTCGTCTCG GCGGCGGTCG GCCAGTTCGA CGGACAGCTC
GGCGTCTGGC GCGGGTGGGA GGCGGACAAG CCCTGCTATC GCTGCCTGGT CGGCGACGAT
CCCGACCGAC CCGACATCAG CTGCGCCGAC CAGGGCGTGC TCGGCGCGCT GACCGGGGTG
ATGGGCAGCC TCGGCGCGAT GGAGGCGGTC CGCGCGATCA CCGGCTTCGG CGACGATCCG
GCGGGCCGGC TGCTGCTGGT CGACGCGCTC GCCTTCCGCT TCCGCACGAT CGCGGTGCCC
AAGGACCCGG GGTGCCGGTG CGCGGGCTGA
 
Protein sequence
MSLTDEQLDR YARHIILKEI GGAGQQALLK ATVAVIGAGG IGSPAIQYLA AAGIGLLRVI 
DDDVVDLSNL QRQTLFGTAD IGCPKAEVAA ARVAAMNPDV LVEPVTVRID ADTADDLLEG
ADLVLDGCDN FATRLAVSDA ATRLGIPLVS AAVGQFDGQL GVWRGWEADK PCYRCLVGDD
PDRPDISCAD QGVLGALTGV MGSLGAMEAV RAITGFGDDP AGRLLLVDAL AFRFRTIAVP
KDPGCRCAG