| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4860 |
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| Symbol | |
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| ID | 5200403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5355592 |
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| End bp | 5356755 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584417 |
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| Product | hypothetical protein |
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| Protein accession | YP_001265335 |
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| Protein GI | 148557753 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2311] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.138362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCGC CCCTCCGGCC CGCCGATCCC GCCCAGCGGC TCCTGTCGAT CGACGCGCTG
CGCGGGCTCG CCCTGTGCGG CATATTGCTG ATCAACATCG TCGACATGGG CGGCCCGATC
GCGATGGACC GGCCGATGGC CGAGCCGTCG CTGGCCTCGC CCGACTGGCA GCTCTGGGGC
TTCTCCCAGC TGTTCATCAC CGGCACGATG CGCGGTCTCT TCTCGATGCT GTTCGGGGTC
GGCCTGCTGC TGTTCCTCGG CGACGACGAC AGCGCCGATC GGCCGCGCCT CTACATGCGC
CGGCTGATCC TGCTGTTCCT GTTCGGCATC GTCGACTCCA CATTTCTGCT CTGGCCCGGC
GACATCCTGC TGATCTACGC GCTGGCCGGG ATCGTCGCGA TGATCCTCCA CATGCTCTCG
CCGGCCCAAC TCGTCTCGGC GGCGGCGGTG ATCCTGCTGC TGCTGTCGGC CTGGGCCGGG
CTGGAGGCGC CGTCCTTCCA GCCCGGCGAC ACCGTCTATT CGGCCGAGAT GCTGGCCCGC
GAGGGCGCCG CGCGGCTGGG CGGCTATTGG CAGACCTTCG ATTATATGAG CTACGTCAGC
TGGAACTGGA CGGTCAACGC GCTCACCTAT CGCTGGATCG GCGACGCGCT CGCCTTCATG
CTGGTCGGCA TGGCGCTCTA TCGGATCGGC CTGTTCGACA GCCGCTTCGA GGAGCGCCGT
CTGTGGCAGA TGGTGCGGAT CGGCTATCCG GTCGGGCTCG CATTGCGCCT GATCCACGCC
GTGCTGGTCT TCCACAACGA CGGCGCGCCG ACCGTGGTCA GCGGCATCGT CGACCAGCCG
GGGCGGCTGG CGATGACGAT CGGCCATGCC GGCCTGTTCC TGCTGCTGTG GCGCAAGGGA
GCGTGGCCGC GCCTGATGAG CGGCCTCGCG CGGATGGGGC GGATGGCGCT GACCCTCTAT
CTCGGCCAGA GCCTGATCGC GGCGTGGATC TTCTCGGGCT TCGGGCTGGG CCTGTGGAAT
CGGCTGTCCT GGCCGGCGCT GTGGCTGGTC GCCTTCGTCA TCCTCGCCGC CCAGGCGCTG
TTCGCGGCGT TCTGGTTCCG GGGGTTCCGC TACGGCCCGG TCGAATGGCT CTGGCGCTGG
GGGACCTACG GCCGGCGGCC TTGA
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| Protein sequence | MSSPLRPADP AQRLLSIDAL RGLALCGILL INIVDMGGPI AMDRPMAEPS LASPDWQLWG
FSQLFITGTM RGLFSMLFGV GLLLFLGDDD SADRPRLYMR RLILLFLFGI VDSTFLLWPG
DILLIYALAG IVAMILHMLS PAQLVSAAAV ILLLLSAWAG LEAPSFQPGD TVYSAEMLAR
EGAARLGGYW QTFDYMSYVS WNWTVNALTY RWIGDALAFM LVGMALYRIG LFDSRFEERR
LWQMVRIGYP VGLALRLIHA VLVFHNDGAP TVVSGIVDQP GRLAMTIGHA GLFLLLWRKG
AWPRLMSGLA RMGRMALTLY LGQSLIAAWI FSGFGLGLWN RLSWPALWLV AFVILAAQAL
FAAFWFRGFR YGPVEWLWRW GTYGRRP
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