Gene Swit_4809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4809 
Symbol 
ID5200276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand+ 
Start bp5296033 
End bp5296674 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content76% 
IMG OID640584366 
Productcytochrome c, class I 
Protein accessionYP_001265284 
Protein GI148557702 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.439898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGCGC CCGTCATCCT CATCGGCGCG GCGGCGGTCG TGGCGGCGGC GGCGGGCTGC 
TCCACCGCCA CGCCCGCGCC GGAGGCCTCG TCGCCGGTCG CCCGCGGCCG GGCCTATTAC 
ACCACCTGCC AGGGCTGCCA CGGCAATGCC GGCGAGGGCT TCGCCGGCAT GAAGGCGCCG 
CGCCTCGCGG GCCTGCCGGC GGACTATGTC GCCGAGCAGC TCATCCTCTA CCGCAAGGAC 
CTGCGCGGCG GCCCCGCCGA CTTCCAGGGC GTGCAGATGA ACGGCCGCGC CAAGGCGCTG 
CCCGACGAGC AGGCGGTGCA CGACGTCGCC GCCTATATCG CGACGCTGCC GTCCCCGCCG 
CCGGCCAAGG TGGTGGCGAC GAAGGGCGAG GCGGGGGCGA CGCTCTACGA AAGCTGCGCC 
GCCTGCCATG GCGCGCGCGG CGAGGGCAAT GCCGAACTCG GCGCGCCGCC GCTGGCGGGT 
ACCGACGCCG ACTATCTCGC GCGGCAGCTC CGCAATTTCA GGAAGGGCAT TCGCGGGCGC 
GAGGGCGACG AGAAGGGCCG GCAGATGGCC GCCGCCGCCG CGATCCTGCC CGACGAGGCG 
GCGATCGACG CGGTCGCGGC CCATGCCGGC GCGCTGCGCT AG
 
Protein sequence
MRAPVILIGA AAVVAAAAGC STATPAPEAS SPVARGRAYY TTCQGCHGNA GEGFAGMKAP 
RLAGLPADYV AEQLILYRKD LRGGPADFQG VQMNGRAKAL PDEQAVHDVA AYIATLPSPP 
PAKVVATKGE AGATLYESCA ACHGARGEGN AELGAPPLAG TDADYLARQL RNFRKGIRGR 
EGDEKGRQMA AAAAILPDEA AIDAVAAHAG ALR