Gene Swit_4805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4805 
Symbol 
ID5199353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5291400 
End bp5292581 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content72% 
IMG OID640584362 
Producthypothetical protein 
Protein accessionYP_001265280 
Protein GI148557698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.279377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.424699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA GCGGACAGAA GCGGACGATC GACGGCGCGG CGGGGCAGGA TAGCCTCGCC 
GCGCTGATCA CGCTCGGCAC GGCGGGGGTG ATGACCTTCC TGGCGATGCC GGTGATCGCC
GCCGCGCTGG TCAACGTGCT CGGCGCCAGC GAGCGCGACG TCGGCCTCTT CTCGACGATC
CAGCTCATCA CCCTGTCCTG CGGCTGCCTG CTCAGCACCT TCCTGCCGCG CGGGCAGTTC
CGCCGCTTCG GCATCGCCGC GCTCGCGGTG ATGATCGTCT GCGACCTGCT CTGCCTCACC
CGCCCAGGCT GGACGGTCTT CCTGGTCCTG CGCGGCATCG GCGGCGCGGC CGGCGGGATC
GCGGTGTCGC AGGCGACCGC CGCCATGGCG CGGACCCGCA ACGCCGAACG CAGCTTCGGC
CTGTTCCTCG CGCTCCAGAC CGTGCTGTCG ATCGTCTGCG TCTATGCGAT GCCGCCGATC
ATCGGCGCCT TCGGCTTCGC CGCCGCCTAT AGCGTGCTGC TCGCCTTCGA CATCCTCGCC
CTCGCGCTCG TCGCCACCCG GCTCAGGCCG ATCAGCGCGG CGGAGGAGCA TCACGCCATG
CCCGGCAACG ATCTCGCCGG CTGGCTGCGC AGCGGCGGCA TGCTGGTGTC GATCCTCTGC
TTCTTCATCG GCGTCGGCGC GCTGTGGACC TTCCTCGCGC TGCTCGGGCA GGGGATCGGC
CTCGGCGAGA CGCAGGTCGC GCTGGTCCTC AGCATCTCCA AGCTGGTCGC CTTCGCGGCG
TCCTTCCTGC CCGGCATCGT CGGCGGCCGC TTCGGCCGGA TCGCGCCGAT CGTCGCGGCG
GCGGCGGTGC TGGTCGCGGC GGTGCAGGTC TATGCAGTGG CCGGAAGCTT CGCGGTCTTC
GTCCTCGCCA CCGCGATGTT CAGCTTCGGC TGGTACGTCA TCTATCCCTT CCAGCTCGGC
GCGCTCGGGC AGGTCGACCA TGACGGCCGG CCGATGCTCG CCGCCGCGGC GCTGACCGGC
GCGGGGCTCG GCCTGGGGCC GGCTCTCACC GTGCTCGGCC CGGGCGGCCC GGCCGGCATC
TACCTGATCG CGACGCTCGC CTTCCTCGGC GCCGGCCTGT TCGCGATCGC CGCGCTGCTG
CGGCCATCCT CCCCGGCTCC CATCCTCGCA CAAGGTTCGT GA
 
Protein sequence
MAKSGQKRTI DGAAGQDSLA ALITLGTAGV MTFLAMPVIA AALVNVLGAS ERDVGLFSTI 
QLITLSCGCL LSTFLPRGQF RRFGIAALAV MIVCDLLCLT RPGWTVFLVL RGIGGAAGGI
AVSQATAAMA RTRNAERSFG LFLALQTVLS IVCVYAMPPI IGAFGFAAAY SVLLAFDILA
LALVATRLRP ISAAEEHHAM PGNDLAGWLR SGGMLVSILC FFIGVGALWT FLALLGQGIG
LGETQVALVL SISKLVAFAA SFLPGIVGGR FGRIAPIVAA AAVLVAAVQV YAVAGSFAVF
VLATAMFSFG WYVIYPFQLG ALGQVDHDGR PMLAAAALTG AGLGLGPALT VLGPGGPAGI
YLIATLAFLG AGLFAIAALL RPSSPAPILA QGS