Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4805 |
Symbol | |
ID | 5199353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5291400 |
End bp | 5292581 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640584362 |
Product | hypothetical protein |
Protein accession | YP_001265280 |
Protein GI | 148557698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.279377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.424699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGA GCGGACAGAA GCGGACGATC GACGGCGCGG CGGGGCAGGA TAGCCTCGCC GCGCTGATCA CGCTCGGCAC GGCGGGGGTG ATGACCTTCC TGGCGATGCC GGTGATCGCC GCCGCGCTGG TCAACGTGCT CGGCGCCAGC GAGCGCGACG TCGGCCTCTT CTCGACGATC CAGCTCATCA CCCTGTCCTG CGGCTGCCTG CTCAGCACCT TCCTGCCGCG CGGGCAGTTC CGCCGCTTCG GCATCGCCGC GCTCGCGGTG ATGATCGTCT GCGACCTGCT CTGCCTCACC CGCCCAGGCT GGACGGTCTT CCTGGTCCTG CGCGGCATCG GCGGCGCGGC CGGCGGGATC GCGGTGTCGC AGGCGACCGC CGCCATGGCG CGGACCCGCA ACGCCGAACG CAGCTTCGGC CTGTTCCTCG CGCTCCAGAC CGTGCTGTCG ATCGTCTGCG TCTATGCGAT GCCGCCGATC ATCGGCGCCT TCGGCTTCGC CGCCGCCTAT AGCGTGCTGC TCGCCTTCGA CATCCTCGCC CTCGCGCTCG TCGCCACCCG GCTCAGGCCG ATCAGCGCGG CGGAGGAGCA TCACGCCATG CCCGGCAACG ATCTCGCCGG CTGGCTGCGC AGCGGCGGCA TGCTGGTGTC GATCCTCTGC TTCTTCATCG GCGTCGGCGC GCTGTGGACC TTCCTCGCGC TGCTCGGGCA GGGGATCGGC CTCGGCGAGA CGCAGGTCGC GCTGGTCCTC AGCATCTCCA AGCTGGTCGC CTTCGCGGCG TCCTTCCTGC CCGGCATCGT CGGCGGCCGC TTCGGCCGGA TCGCGCCGAT CGTCGCGGCG GCGGCGGTGC TGGTCGCGGC GGTGCAGGTC TATGCAGTGG CCGGAAGCTT CGCGGTCTTC GTCCTCGCCA CCGCGATGTT CAGCTTCGGC TGGTACGTCA TCTATCCCTT CCAGCTCGGC GCGCTCGGGC AGGTCGACCA TGACGGCCGG CCGATGCTCG CCGCCGCGGC GCTGACCGGC GCGGGGCTCG GCCTGGGGCC GGCTCTCACC GTGCTCGGCC CGGGCGGCCC GGCCGGCATC TACCTGATCG CGACGCTCGC CTTCCTCGGC GCCGGCCTGT TCGCGATCGC CGCGCTGCTG CGGCCATCCT CCCCGGCTCC CATCCTCGCA CAAGGTTCGT GA
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Protein sequence | MAKSGQKRTI DGAAGQDSLA ALITLGTAGV MTFLAMPVIA AALVNVLGAS ERDVGLFSTI QLITLSCGCL LSTFLPRGQF RRFGIAALAV MIVCDLLCLT RPGWTVFLVL RGIGGAAGGI AVSQATAAMA RTRNAERSFG LFLALQTVLS IVCVYAMPPI IGAFGFAAAY SVLLAFDILA LALVATRLRP ISAAEEHHAM PGNDLAGWLR SGGMLVSILC FFIGVGALWT FLALLGQGIG LGETQVALVL SISKLVAFAA SFLPGIVGGR FGRIAPIVAA AAVLVAAVQV YAVAGSFAVF VLATAMFSFG WYVIYPFQLG ALGQVDHDGR PMLAAAALTG AGLGLGPALT VLGPGGPAGI YLIATLAFLG AGLFAIAALL RPSSPAPILA QGS
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