Gene Swit_4775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4775 
Symbol 
ID5199429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5252979 
End bp5253473 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID640584332 
ProductMarR family transcriptional regulator 
Protein accessionYP_001265250 
Protein GI148557668 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0667065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0390865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAGC CGCAAAAGAC CCGCGAAACC GCGCGATCGA GCCTCGAAGA GGCGCAGGCC 
GGGAATAGCT GGCTCAACGA CTATCTCCCC TACCAACTCT ATCGGCTGAC CAACCGGCTC
GACCAGAGGC TGCAGGCGCG CCTGCGCAGC CAGGGGATCA AGCCGTCGCG CTGGCGCGTG
ATGAGCGTGC TGCGGTCCTA CGGCACGCTC ACCATCGGCA AGATCGCCGA ACAGGCGCTG
ATGGAGCAAC CCACGGTCAG CCGCGTGATC ATGCAGCTCG AGGCCGACGG CCTGGCGACG
CGCCAGGCCT CGACCGAGGA TTCGCGCGCG ACCGAGGTGA CGCTGACCCC GGCCGGGATC
GAGAAGCTCG AAGCCATCCT GCTGACCGCC TACCGTCACC AGCAGGAAGC GCTCGCCGGC
CTGTCGCGCG CGGAGCTCGA CACGCTGCGC GCCACGCTCA ACCGGGTCGA GCAGAACATC
GATTTCTATC AATGA
 
Protein sequence
MTKPQKTRET ARSSLEEAQA GNSWLNDYLP YQLYRLTNRL DQRLQARLRS QGIKPSRWRV 
MSVLRSYGTL TIGKIAEQAL MEQPTVSRVI MQLEADGLAT RQASTEDSRA TEVTLTPAGI
EKLEAILLTA YRHQQEALAG LSRAELDTLR ATLNRVEQNI DFYQ