| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4745 |
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| Symbol | |
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| ID | 5196614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5224068 |
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| End bp | 5225249 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640584301 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001265220 |
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| Protein GI | 148557638 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.19985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATGA ACGTCGAATC CGGCATCCAG ACCGACTATG CGGCCTATGA CTATGACGAC
GGCCAGGCGC GCCGCCGCCG CCGGATCATC ATCGGCGGGG TGATCGCCGC CGTGGTCGTG
GCCGTGGTCG CGGGGGTGAT GATCTTCGGC GGCAACAAGG CCGCCCCGCC CGCCCCGCCC
GCCCCCGGCG TCACCGTGAT CGTGCCCGGC CTGACCGACG TCGCCGCGAC GATCTCGTCG
ACCGGCACGC TGTTCGCCAA GCGCGAGATG CCGGTCGGCA TCGCCGGCGA GGGCGGCATG
GTGCAGGCGG TCCTGGTCGA ACCCGGCACC TGGGTCGCCG CCGGCCAGAC GCTGGCGGTG
ATCGAGCGCT CGGTCCAGGC GCAGCAGGCC AATTCGCTCT CCGCCTCGGT CCGGGTCGCC
CGCGCCGACG CCGAGCTTGC CCAGGCCGAA CTCGACCGCG CCAAGGCGCT GGTCGCGCGC
GGCTTCATCT CCAAGGCCGA CATCGACCGC CGCACCGCGA CGCGCGACGC CGCCGTCGCG
CGGGTCGCGG TCGCGCAGGC CCAGCTCGGC GAGCAGCGCG CCCAGATCGG CCGCCTCGAC
ATCCGCTCGC CCGCCGCCGG CCTGGTGCTG ACCCGCGCGG TCGAGCCCGG CCAGGTCGTC
AATGCCAGCA ACGGCGCGCT GTTCCGCGTC GCCAAGGGCG GCGAGATGGA GATCCGCGCC
CAGCTCGTCG AGCGCGACCT CGCCCGCCTC AAGGTCGGCG ACACCGCGCA GGTGACGCCG
ATCGGCACCC GCAAGACCTT CACCGGCACG ATCTGGCAGC TTTCGCCGGT GATCGACCCG
CAGACCCGCC AGGGCGTCGC CCGCATCCAG CTCGCCTATG ATCCGGCGCT GCGGCCCGGC
GGCTTCGCCA CCGCGACGAT CAGCAGCGGC CGCGTCACCG CGCCGCGCCT GCCCGAATCC
GCGGTGCTGA GCGACGACAA GGGGTCGTTC GTCTACAGCG TCGGCAAGGA CGGCAAGGTG
GTCCGCCACG ACGTGAAGGT CGGCGACTTC TCCGACGCGG GCATCGTCAT CCTCTCCGGC
CTGCGCGGCG ACGAGAAGGT GGTGCTGTCG GCCGGCGCCT TCCTGAACCC CGGTGACAAG
GTGACGCCGC AGCTCGCCAA GCCCGACGCC CTCGCGCACT GA
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| Protein sequence | MGMNVESGIQ TDYAAYDYDD GQARRRRRII IGGVIAAVVV AVVAGVMIFG GNKAAPPAPP
APGVTVIVPG LTDVAATISS TGTLFAKREM PVGIAGEGGM VQAVLVEPGT WVAAGQTLAV
IERSVQAQQA NSLSASVRVA RADAELAQAE LDRAKALVAR GFISKADIDR RTATRDAAVA
RVAVAQAQLG EQRAQIGRLD IRSPAAGLVL TRAVEPGQVV NASNGALFRV AKGGEMEIRA
QLVERDLARL KVGDTAQVTP IGTRKTFTGT IWQLSPVIDP QTRQGVARIQ LAYDPALRPG
GFATATISSG RVTAPRLPES AVLSDDKGSF VYSVGKDGKV VRHDVKVGDF SDAGIVILSG
LRGDEKVVLS AGAFLNPGDK VTPQLAKPDA LAH
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