| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4742 |
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| Symbol | |
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| ID | 5198777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 5218307 |
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| End bp | 5219122 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584298 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001265217 |
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| Protein GI | 148557635 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.683328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.766945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGGGA GCAAATCATG GGCGCAACGG CCCTATCCGC ACTTGGCATC GAACGTGGCC
ACGGGCATGG TCGGGGGCAT GGCCACCGAT CCGACCGCGA AACCATCGGG CGATAGCATG
CGTATCGCGG TCCTCGACGA CGAGGCGGCC ATGCTGGCCT TCGTCACCCA GACGCTGATC
GAAGCCGGCC ATTACTGCTA CGACTTCCCC AACGCGCGGA CGCTGATCTC CCGGCTGCGG
CAGGACACGT TCGACCTGGT GATCCTCGAC TGGAACATGC CCGACAAGAG CGGGGTCGAG
ATCATCCAGT GGATGCGCGA GAATATGGAC AAGCCGGTCC CCTCGCTGCT GCTGACCAAC
CGCAACAGCG ACGAGGACAT CGTCGCGGGG CTCGACGCGG GCGCCGACGA TTATGTCATC
AAGCCGGTCC AGCCGTCGGT GCTGCTCGCC CGGATCAACG CGATCCACCG CCGCACCGGC
CCGCGCGAGG CGATCGGGGC GAACGAATCC TACGGCCCCT TCACGCTGCA TCCGGCGCGA
CAGATGGTGG CGGTCGACGG CGAGAACGTC ACCCTGACCG CCAAGGAGTT CGAGCTGGCG
GCGACGCTGT TCCGCAACAT GCACCGGCCG CTGTCGCGCT CCTACCTGCT GGAGATCGTC
TGGGGACGGA ACCCCGACCT GCCGACCCGG ACGCTCGACG CGCACATCTC GCGCATCCGC
GCCAAGCTGG GGCTGCGGCC CGAGCGCGGC TTCCGCCTGA TCCCGGTCTA CAGCTATGGC
TACCGGCTCG AGGCGCTGGA AGCCGAAGAC AGTTGA
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| Protein sequence | MGGSKSWAQR PYPHLASNVA TGMVGGMATD PTAKPSGDSM RIAVLDDEAA MLAFVTQTLI
EAGHYCYDFP NARTLISRLR QDTFDLVILD WNMPDKSGVE IIQWMRENMD KPVPSLLLTN
RNSDEDIVAG LDAGADDYVI KPVQPSVLLA RINAIHRRTG PREAIGANES YGPFTLHPAR
QMVAVDGENV TLTAKEFELA ATLFRNMHRP LSRSYLLEIV WGRNPDLPTR TLDAHISRIR
AKLGLRPERG FRLIPVYSYG YRLEALEAED S
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