| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4738 |
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| Symbol | |
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| ID | 5198292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5211320 |
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| End bp | 5213590 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640584294 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001265213 |
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| Protein GI | 148557631 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCACTCT CTAGCCTGCT CGCGGCGCCG CTGTCGGCGC GTCCCGTCCG GATCGACATT
CCCGCCGCCG ACCTCGGCGA CGCGCTGTTC GCGCTGTCGC GGCAGACCGG GCTGTCGGTC
GGCATGGCGG GCGCCATTCC CCGTCACCGC ACCCGGCCGA TCAGCGGCAC GATCGAGCCC
GCCGCCGCGC TCGAACGGCT GTTGCGGGGC AGCGGCCTGC GCGCGGTCCG CGCCGCCGGG
CTGTGGCGGC TCGAACGGCT CCCGCGCGAG GTGACGCGGT CGGGCTTCGT CGGGCCGACC
GAGGCGATCG AGGACATCAT CGTCACCGGC ACCAAGCGCG ACGAGAATCT CGCCAGCGTG
CCGATCGCGG TCAGCCTGAT GCGGCCCGGC ATCGCCGACC GGCTGCTCTA CGGGCGGGGC
CTGCACGACA TGATCGAGAC CGGGGAAGGG GCGTTCGCCA CCAATCTCGG CCCCGGGCGC
GACCGCATCT TCCTGCGCGG CGTCGCCGAC AGCGCGTTCA ACGGGCCGAC CCAGTCGACG
GTGAGCCTGC TGCTCGACGA CGCGCGGGTC AGCTACGCCA CCCCCGATCC CGACCTGCGC
CTCGTCGACA TCGATCATGT CGAGCTGCTG CGCGGGCCGC AGGGGACGCT CTACGGCACC
GGCGCGCTGG GCGGGATCAT CCGGATCGTG CCGAACAAGC CCGACCTCGC CGACGGGTCG
GGCTTCGCCG CGATCGACGC CGGCGTCACC CGCCACGGCG CCGCCAGCGG CGCGATCGAG
GGCGGGATCA ACGTCCCGCT GTTCCGCGAC CGGCTGGCGA TCCGCATGGT CGGCTATGCC
GAGCGGATCG GCGGCTGGAT CGACGATGCC GGCCGGGGCG AACGCAACGT CAACCGCACC
GCGCGATACG GCGGGCGGCT GGCGCTGCGC TGGCAGGCGA CGCCCGACTG GATGGTCGAC
CTCGGCGGCG CGATCCAGGG GATCAATTCC GACGACAGCC AATATGCCGC GCGCGGCCTG
GTCCGCTCGA CCGCGCTGGC CGAGCCCCAT GACAATGATT TCGTCGCGCT GACCGCGACC
GTCCGGGGCG TGGTCGGCGC GTTCGATTTC GTGTCGGCCA GCGCCTTCGT CCACCATGAG
GTGGAAAGCG TGTTCGATGC CGGCGCGGTG GCGGCGGCGC GCGGCCTGCC GGCGCCGCTC
GGCTTCAGCG ACATGCGCCG GCTGCGGCTC GGCACGCAGG AATGGCGGCT CAGCGACCCG
GCGGCGACGC GGCCCTGGGT GCTCGGCCTC GCGCTGCTCA AGGCCGACAA CATCTATCTC
GGCCGCTTCT TCGCTCCGGG CGGCGGGGCG TTGCAGGACA TCTCGCTCCA CGACGACGCG
ATCGAGGCGG CGCTGTTCGG CGAGGCGAGC CAGCCGCTCG GCGGCGCGCT GACCGCGACG
CTCGGCCTGC GCGGCTTCTA TTCGAAGGTC GACAACGAGC AACAGGGCCA GACCCGCCGC
CGCGCGCGCA AGGCCGGCGT CACCCCCAGC GCGACCCTGT CCTGGGCGCC GCGCGACGGC
GCGCTCGCCT GGCTGCGCTA TGCCAGCGCG ATCCGGCCGG GCGGGCTCAA CCCCGACGGC
GCGCCCGACC TCGCCGATTT CCGCTCGGAC GATCTCAAGA GCGTCGAGCT CGGCTGGCGC
CTGCTGCTGT GGCGGCGGGT GCGGCTGAAC GGCACGCTGT TCGGGTTGCG GTGGGAGAAT
ATCCAGAGCG ACAGCATCGG CACCGACGGT CTCGTCCGCA CGATCAACGC GGGCAAGGGG
CGCAATATCG GGCTCGAGCT CGGCGGATCG GTCGATCTGT CGCCATGGTC GATCGATGCC
CATCTGACCG TGCAGCACGC CCGGCTCTAC GCGCCGTCGG CGGCGGCCAA CGCGGCGGGG
GACGACAACC GGCTGCCGGT GCTGCCCGAT CGCGCCGGCC GGGTGAAGAT CGGCTATGAT
CGCGTGATCG CCGGGATTCC CGCGGGCCTG TTCGTCGCGG CGCGCTACAT GGGCAAGGCG
CGGCTCAGCT TCGATCCGGG GCTCGCCCGC TCGATGGGCG GCTATTGGAC GGCCGATGCG
GGACTGGTCG TCGCGCCGGC CGACTGGCGG GTGGCGCTCA CCGTCTCCAA CCTGTTCGAC
GGCCGGGGCG ACAGCTTCGG CTTCGGCAAT CCCTTCTCGC TGCGTCAGTT CGATCAGCAC
ACGCCCGTCC GCCCGCGCAC CGTCTCGATC CGCATCGAAC GGAAATTCTG A
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| Protein sequence | MALSSLLAAP LSARPVRIDI PAADLGDALF ALSRQTGLSV GMAGAIPRHR TRPISGTIEP
AAALERLLRG SGLRAVRAAG LWRLERLPRE VTRSGFVGPT EAIEDIIVTG TKRDENLASV
PIAVSLMRPG IADRLLYGRG LHDMIETGEG AFATNLGPGR DRIFLRGVAD SAFNGPTQST
VSLLLDDARV SYATPDPDLR LVDIDHVELL RGPQGTLYGT GALGGIIRIV PNKPDLADGS
GFAAIDAGVT RHGAASGAIE GGINVPLFRD RLAIRMVGYA ERIGGWIDDA GRGERNVNRT
ARYGGRLALR WQATPDWMVD LGGAIQGINS DDSQYAARGL VRSTALAEPH DNDFVALTAT
VRGVVGAFDF VSASAFVHHE VESVFDAGAV AAARGLPAPL GFSDMRRLRL GTQEWRLSDP
AATRPWVLGL ALLKADNIYL GRFFAPGGGA LQDISLHDDA IEAALFGEAS QPLGGALTAT
LGLRGFYSKV DNEQQGQTRR RARKAGVTPS ATLSWAPRDG ALAWLRYASA IRPGGLNPDG
APDLADFRSD DLKSVELGWR LLLWRRVRLN GTLFGLRWEN IQSDSIGTDG LVRTINAGKG
RNIGLELGGS VDLSPWSIDA HLTVQHARLY APSAAANAAG DDNRLPVLPD RAGRVKIGYD
RVIAGIPAGL FVAARYMGKA RLSFDPGLAR SMGGYWTADA GLVVAPADWR VALTVSNLFD
GRGDSFGFGN PFSLRQFDQH TPVRPRTVSI RIERKF
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