| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4724 |
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| Symbol | |
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| ID | 5198366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5192315 |
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| End bp | 5193676 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584279 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001265199 |
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| Protein GI | 148557617 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCTG TCCGTGCGCC CGCACCCTTT GAAAGTGCAA TTGTGACCAA ATTTTCCGAG
CTTGGCCTGA TCGAGCCGAT CCAGCGCGCG CTGGCCGCCA AGGGCTACGA CATCCCGACG
CCGATCCAGG CGCAGGCGAT CCCGCCGCTG CTGGAGGGCC GCGACCTGTG CGGCATCGCC
CAGACCGGCA CCGGCAAGAC CGCGGCCTTC GCGCTGCCGT CGCTCCACCA TCTCCACGAC
AATCTCAAGC ATACGCCGCC GCAGGGCTGC CGCATGCTCG TCCTCGCGCC GACCCGCGAG
CTGGCCAGCC AGATCGCCGA GAGCTTCGTC CAGTACGGCA AGTTCCTGCG CCTGAGCGTC
GCCACCGTGT TCGGCGGCGT GCCGATCAAC AAGCAGATTC GCCAGCTCCA GCGTGGCGTC
GACATCCTCG TCGCGACGCC GGGCCGCCTG CTCGACCTGA TCGACCAGCG CGCGCTGAGC
CTGAAGTTCG TCGAGATCTT CGTCCTCGAC GAGGCCGACC AGATGCTCGA CCTCGGCTTC
ATCCATGCGC TCAAGCGGGT CGACCAGCTG CTGCCGAAGA AGCGCCAGTC GCTGTTCTTC
TCGGCGACCA TGCCCAAGGC GATCGCCGAG CTGGGCGACC GTTTCCTGAC CAATCCGGCC
AAGGTGTCGG TCGCGCCGCA GTCGACCACC GCCGAGCGGG TCGAGCAGTT CGCGACCTTC
TGCAACCCGC AGGAGAAGCA GGCGCTGCTG ACGATGCGCA TCCGGTCCGA GCCGATCGAC
CGCGCGCTGG TCTTCACCCG CACCAAGCAT GGCGCCGACC GCGTCGTGAA GAACCTGCGC
GCCGCCGGCA TCGCGGCGGA GGCGATCCAC GGCAACAAGA GCCAGCCGCA GCGCGAGCGC
GCGCTGGGCC TGTTCCGCAC GGGCGAGGTC AAGATCCTCG TCGCGACCGA CATCGCCGCG
CGCGGCATCG ACGTCGGCGG GGTCAGCCAT GTCTTCAACT TCGAGCTGCC CAACGTCGCC
GAGCAATATG TCCATCGCAT CGGCCGCACC GCGCGCGCCG GCGCCGCGGG CATCGCCATC
GCCTTCGTCG CCGATGACGA GCGGCCCTAT CTCAAGGCGA TCGAGAAGCT GACCAAGGTC
AAGCTCGACA TCCAGCCGCT GCCCGACAAT TTCGTCGCGG AGAAGGCCAA GCTGCCCAAG
CCGGCGCCGA GCCAGCCGCA GCCGCAGGGC CATGGCGACC GCAACCGCCG CCACGACGGC
GGCGCGGGTG ACCGCAACGG CCCGGCCAAG CGCCGCTTCA GCCGCCCCAA GGGCGCGCCC
GGCGCGCACC GCAACGCGGT GAAGAAGTTC GGGGCGCGGT GA
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| Protein sequence | MDPVRAPAPF ESAIVTKFSE LGLIEPIQRA LAAKGYDIPT PIQAQAIPPL LEGRDLCGIA
QTGTGKTAAF ALPSLHHLHD NLKHTPPQGC RMLVLAPTRE LASQIAESFV QYGKFLRLSV
ATVFGGVPIN KQIRQLQRGV DILVATPGRL LDLIDQRALS LKFVEIFVLD EADQMLDLGF
IHALKRVDQL LPKKRQSLFF SATMPKAIAE LGDRFLTNPA KVSVAPQSTT AERVEQFATF
CNPQEKQALL TMRIRSEPID RALVFTRTKH GADRVVKNLR AAGIAAEAIH GNKSQPQRER
ALGLFRTGEV KILVATDIAA RGIDVGGVSH VFNFELPNVA EQYVHRIGRT ARAGAAGIAI
AFVADDERPY LKAIEKLTKV KLDIQPLPDN FVAEKAKLPK PAPSQPQPQG HGDRNRRHDG
GAGDRNGPAK RRFSRPKGAP GAHRNAVKKF GAR
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