Gene Swit_4709 details

Gene Information

• Locus tag: Swit_4709
• Symbol: leuD
• ID: 5197187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingomonas wittichii RW1
• Kingdom: Bacteria
• Replicon accession: NC_009511
• Strand: +
• Start bp: 5179787
• End bp: 5180365
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640584263
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001265184
• Protein GI: 148557602
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGCCGA TCCGCGAGGT CGAGGGCCGC GCCCTTCCGC TGGGCCTGAA GAACGTCGAC 
ACCGACGTCA TCATCCCGGC GCAGTATCTC AAGACGATCA CCCGCAAGGG GCTGGGCCGC 
GGCGCCTTCG AGACGATCCG CGCGCAGCCG GGCAACGTCT TCGACGATCC CGAATACAAG 
GGCGCCAACA TCCTAATCGC GGGCGATAAT TTCGGCTGCG GGTCGAGCCG CGAGCACGCC 
GCCTGGGCGC TGGGCGACCT CGGCATCGAC GCGGTGATCG CGCCGAGCTT CTCCGACATC 
TTCTCGGGCA ACGCCTTCAA GAACGGGATA TTGACCGTGG TGCTGCCGCA GGAAGCGGTC 
GACCGGCTGC TCGAGGTCGC CAGGACCCAC CCGATCGGCA TCGACCTGGA GAATCAGACG 
GTCACCACGC CGTTCCAGGA CCGCTTCCGC TTCGAGATCG ATCCGTTCCG CAAGCATTGC 
CTGCTCAACG GTCTCGACGA GGTGGGGATG ACGTTGGCGC AGGACGCGGC GATCTCGACC 
TTCGAAGGCA GGATGGCGGC GGACCGGCCC TGGCTGTGA 

 

Protein sequence

MKPIREVEGR ALPLGLKNVD TDVIIPAQYL KTITRKGLGR GAFETIRAQP GNVFDDPEYK 
GANILIAGDN FGCGSSREHA AWALGDLGID AVIAPSFSDI FSGNAFKNGI LTVVLPQEAV 
DRLLEVARTH PIGIDLENQT VTTPFQDRFR FEIDPFRKHC LLNGLDEVGM TLAQDAAIST 
FEGRMAADRP WL