| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4657 |
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| Symbol | |
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| ID | 5198462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5124950 |
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| End bp | 5125900 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640584211 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001265132 |
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| Protein GI | 148557550 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.933923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC GCCAGCTCCG CCATTTCCTC GCGGTCGCCG ACACGCTGCA TTTCGGCCGC
GCTGCGGAGC GGCTCGGCAT GACCCAGCCG CCGCTCAGCC AGTCGATCCT CGCGCTCGAA
CGCCGGCTCG GCGCGGACCT GTTCGTCCGC TCCAAGCGCA GCGTCGCGCT GACCGCCTTC
GGGCGGCAAT GGCTCGACCA TGTCCGGCCG GCGGTGGAGG CGGTCGCCGC GCTCCCCGCC
GTCGCAGAGC GGTTGCGGTC GGGGGCATCG GGGCGGCTGT CGCTCGCCTT CGTCAGCACC
GCCGACTATA ATGTGCTGCC GACGCTGGTC GCGCGCTATT CCTCGGCCTT CCCGGAGGTC
GAGCTGGAGT TGGTCGAGGC GACCAGCGAC GTCCAGGTCG AGGACCTGCT GAGCGGACGG
ATCAACGCCG GCATCCTGAT CTCGACGCGA TCGGCGCTGC CGCCGGCGCT GGCCTATCGC
CCGCTGCTCA ACGAGCCGCT GGTCGCGGCG GTGCCCGAAA GCTGGATCGA CGAGGGGCGC
CTCGCGACCG GCGACGGAAC GCTGCGCGAT GACCGATGGA TGGCGCAGCC GCTGATCATC
TTCCCGGCGC GGGTCGCGCC CGATTTCCAC GATCTGGTGA TGCGCTTCTA CCGGTCGCGC
GGGCACCAGC CCTTCATCCG GCAGGAGGCG ATCCAGATGC AGACGATCAT CAGCCTGGTC
TCGGCCGGGC TCGGCATGGC GCTGGTGCCG GCCTCGCTGC GGCATCTGGC GCGGACCGGG
GTGCGCTACC TGCCGCTCGC GGGCGCGCCG GAGCTCGAAA CCGGGCTGGC GTGGCGCGAG
CGGGACGACA GCCCGACGCT GGCGGCGTTC CTCGGTATCG CTTTCGAGGC CTTGCCTCAC
CATTCCCCCG CGCCTAGGAC GCCTCCTCAT GCGGCCAACA CGTCATCCTG A
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| Protein sequence | MDLRQLRHFL AVADTLHFGR AAERLGMTQP PLSQSILALE RRLGADLFVR SKRSVALTAF
GRQWLDHVRP AVEAVAALPA VAERLRSGAS GRLSLAFVST ADYNVLPTLV ARYSSAFPEV
ELELVEATSD VQVEDLLSGR INAGILISTR SALPPALAYR PLLNEPLVAA VPESWIDEGR
LATGDGTLRD DRWMAQPLII FPARVAPDFH DLVMRFYRSR GHQPFIRQEA IQMQTIISLV
SAGLGMALVP ASLRHLARTG VRYLPLAGAP ELETGLAWRE RDDSPTLAAF LGIAFEALPH
HSPAPRTPPH AANTSS
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