Gene Swit_4642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4642 
Symbol 
ID5198402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5109581 
End bp5110291 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content72% 
IMG OID640584196 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001265117 
Protein GI148557535 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3931] Predicted N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.964655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG TGCTGCTGAT CGCCGACCAT GCGTCGAACC ATGTGCCGGC CGATATCGAC 
CTCGACATCG ATCCGGTGCT GCTGAACCAG CATATGGCGA TCGACATCGG CGTCGATCCG
CTCGGCCGGC TGCTCTGCGC CCGGCTCGGC ATGGACGGAA TCTTCGGCCC GGTCTCGCGC
CTCGTCATCG ACCTCAACCG CGAGGAGGAC GCCGCCGGCC TGATCCCGTC CGAAAGCGAC
GGCTTCGCGA TCCCGGGCAA CAAGCTGCTC GACGCGGACG GGCGGCGGGC GCGGGTCGAG
CGCTTCTGGC GGCCCTATCA TCAGGGGATC GCCGCGCGGA TCGCGGCGGA GCGCCCCTGC
CTGATCGTGT CGCTGCACAG CTTCACGCCG CGCCTGTCGG CCCGGCCCGA GGAGGCGCGG
CCCTGGCAGG TCGGCGTCCT CTACAACCGC GACGACCGCG CCGCCCGGCC CGGCATCGCC
GCGCTGCGCG CCGCCGGCAT CGTCACCGGC GACAACGAGC CCTATTCGGG CAAGGTGCTC
AACGCGACGA TGAACATGCA TGCCGAGGCG AACGCCGTCC CCTATCTGGG GCTGGAGGTG
CGCCAGGACC TGATCGGCGA CGAGGCGGGC GTGGCGGCCT GGGCCGACCG GCTGGGACCG
GTGATCGCCG AGGTGGCGGA CGGCCTGCGC AAGGCCGCCG CCGATCGCTG A
 
Protein sequence
MSDVLLIADH ASNHVPADID LDIDPVLLNQ HMAIDIGVDP LGRLLCARLG MDGIFGPVSR 
LVIDLNREED AAGLIPSESD GFAIPGNKLL DADGRRARVE RFWRPYHQGI AARIAAERPC
LIVSLHSFTP RLSARPEEAR PWQVGVLYNR DDRAARPGIA ALRAAGIVTG DNEPYSGKVL
NATMNMHAEA NAVPYLGLEV RQDLIGDEAG VAAWADRLGP VIAEVADGLR KAAADR