Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4639 |
Symbol | |
ID | 5196698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5106211 |
End bp | 5106780 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640584194 |
Product | nitroreductase |
Protein accession | YP_001265115 |
Protein GI | 148557533 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.564298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCC GTAGCAGCGA TACCAACGTC GACCGCCTGT TCCTCGACCG CTGGTCGCCC CGCGCCTTCG ACGGGTCGCG GCTGTCGGCG GAGGACCGCG ACGCGCTGTT CGAGGCCGCG CGCTGGGCGC CGTCGGCGTT CAACGCCCAG CCGTGGCGCC TGCTCTATGC GGAGCAGGGC GGCGCCGACT GGGATCGCTT CGTCGGCCTG CTCCTTCCCG CCAACCAGGC CTGGGCGGGG AACAGCTCGC TGCTGATCGT CTTCGTGTCG GAAACGACCT TCAAGGACAG CCTGTCGCAC AGCCACAGCT TCGACACCGG CGCCGCCTGG ATGTCGCTGG CGCTGCAGGC GGAGAAGCTG GGCCTGCGCG CGCACGGCAT GGCCGGCGTC GACTTCGACG CGGCGCGGCG CGAGCTCGGC GTGCCCGACG GCTTCCGCAT CGACGCCGCG GCGGCGGTCG GCCGGCAGGC CGATCCGTCG GTGCTGCCCG AGAAATATCG CGAGCGCGAG AAGCCGAGCG ACCGCAAGGC GCTCGACCAG ATCGCCTTCG CCGGCAATTT CGCGGGCTGA
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Protein sequence | MTGRSSDTNV DRLFLDRWSP RAFDGSRLSA EDRDALFEAA RWAPSAFNAQ PWRLLYAEQG GADWDRFVGL LLPANQAWAG NSSLLIVFVS ETTFKDSLSH SHSFDTGAAW MSLALQAEKL GLRAHGMAGV DFDAARRELG VPDGFRIDAA AAVGRQADPS VLPEKYRERE KPSDRKALDQ IAFAGNFAG
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