| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4595 |
|---|
| Symbol | rplM |
|---|
| ID | 5197818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 5048526 |
|---|
| End bp | 5049005 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640584149 |
|---|
| Product | 50S ribosomal protein L13 |
|---|
| Protein accession | YP_001265071 |
|---|
| Protein GI | 148557489 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGC TCATGAAGAC CACCAAGGTG GCGACCCCCG CCACGGTGGA AAAGAAGTGG
CACATCGTCG ACGCGGAAGG GCTGATCGTC GGCCGCGCCG CCTCGATCAT CGCCAATATC
CTGCGCGGCA AGCACAAGCC GAGCTACACC CCGTTCATCG ATTGCGGCGA CAACGTCATC
GTCATCAATG CGGAGAAGGT GCGCTTCACC GGCAAGAAGC TGACCCAGAA GGTCTATTAT
CGCCACACCG GCTATGCCGG CGGCATCAAG GAAGCCCGCG CGGACAAGGT CCTCGACGGC
CGCTTCCCCG AGCGCGTGCT GGAAAAGGCG ATCGAGCGCA TGATCCCGCG CGGCCCGCTC
GGCCGCCAGC AGATGCGCAA CCTGCGCATC TTCAAGGGCG CGGAGCATCC GCACGCCGCC
CAGAACCCTG AAGTCCTCGA CATCGCGTCG ATGAACCGCA AGAACAAGGT GGGCGCATAA
|
|---|
| Protein sequence | MKALMKTTKV ATPATVEKKW HIVDAEGLIV GRAASIIANI LRGKHKPSYT PFIDCGDNVI
VINAEKVRFT GKKLTQKVYY RHTGYAGGIK EARADKVLDG RFPERVLEKA IERMIPRGPL
GRQQMRNLRI FKGAEHPHAA QNPEVLDIAS MNRKNKVGA
|
|---|
| |