Gene Swit_4577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4577 
Symbol 
ID5196632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5034704 
End bp5035819 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content72% 
IMG OID640584131 
Productdihydropteroate synthase 
Protein accessionYP_001265053 
Protein GI148557471 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.80601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCT CCCGCTACGC CCGGCTCTAT TTCCGGCCGA CCGCCTTCGT CGCCTCGCCC 
TTCGGCCATG CCGAGGGCAC GGTGGCCCGG CTGGCGGGCG GACTGGTCTG GTTCTCCGCC
TATGAGGTGA TCGCCGTCGA TGGGGGGCAG CGGGTCGCGA CCCGCCATGT GCCCGTCGCG
GCGATCGATG CTTTCGTCGA CAGCCTGTCC GGCGAGCAGG CGGAGGACGC GCGGCGGACG
ATCGCGCGGA TCGTGGCGCC GCGCCCGCCG GTCGAACTGG GCGAGCGCGT CCTGCGCTTC
GATCAGCCGC AGGTCATGCT GATCCTCAAC ATCACGCCCG ACAGCTTCTC GGACGGCGGC
AACCATCTCG ACGACCCCGC CGCCGCGACC GATGGCGCCT TCGCGGCGGT CGAGGCGGGG
GCGGCGATCG TCGATGTCGG CGGGGAGTCG ACCCGGCCGG GCGCGCAGCC GGTCTGGGAG
GGCGACGAGA TCGCCCGGAT CGAGCCGGTG GTGCGGCGGC TGGCGGCGGG CGGGGCGATC
GTCTCGATCG ACACGCGCAA GGCGGCGGTG ATGGCGGCGG CGCTGGCGGC GGGGGCCGCG
ATCGTCAACG ACGTCTCCGC GCTCGTTTAT GACCCGAAGG CGGCTACGCT GCTGGCGCGG
CACGATTGCC CGGTCGTGCT GATGCACCAT CAGGGCGATC CCGAGACGAT GCAGCGCGAG
CCGCGCTACG GCGACGCGCT GATCGAGGTC TATGACTGGC TGGCGGAGCG GATCGCCTTC
GCCGAGGCGG CGGGCATCGC GCGCGGCCGG ATCATCGTCG ATCCCGGCAT CGGCTTCGGC
AAGAACCTCC GCCACAATCT CCAGATATTG AACGGGCTGG CGCTGTTCCA CGGCCTCGGC
TGTCCGCTGC TGCTGGGCGC CAGCCGCAAG CGGATCATCG GCGCGCTGTC GAACGAGGCG
CCGGTCGACC AGCGCCTCGG CGGCTCGGTC GCGCTGGCGC TTCACGGCGC CCAGATGGGC
GCGCAGATAT TGCGGGTCCA CGACGTGCCC GAGACGGTGC AGGCGATCCG GGTGTGGCGC
GGGATGCGCG ACGAGGCGTT GACGCCTTCC TTTTGA
 
Protein sequence
MSISRYARLY FRPTAFVASP FGHAEGTVAR LAGGLVWFSA YEVIAVDGGQ RVATRHVPVA 
AIDAFVDSLS GEQAEDARRT IARIVAPRPP VELGERVLRF DQPQVMLILN ITPDSFSDGG
NHLDDPAAAT DGAFAAVEAG AAIVDVGGES TRPGAQPVWE GDEIARIEPV VRRLAAGGAI
VSIDTRKAAV MAAALAAGAA IVNDVSALVY DPKAATLLAR HDCPVVLMHH QGDPETMQRE
PRYGDALIEV YDWLAERIAF AEAAGIARGR IIVDPGIGFG KNLRHNLQIL NGLALFHGLG
CPLLLGASRK RIIGALSNEA PVDQRLGGSV ALALHGAQMG AQILRVHDVP ETVQAIRVWR
GMRDEALTPS F