| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4552 |
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| Symbol | |
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| ID | 5199870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5007443 |
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| End bp | 5009503 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640584105 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001265028 |
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| Protein GI | 148557446 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.4064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATA GCGGCGAGAT CGTCGGGGAT GCGTCCTCGA ATACATATTC TATTGGTACG
GTTCCGAAAT ATATTGTCGA ACTGACGGGT GGCGGCACCG ATAAGGTGAT CGCGCAGACC
AACTATGTCC TGCCCGACAA TGTCGAGAAC CTGGAGATCT GGGGCGGCTA TGCCGGGGTC
GGCAATGCGC TCGCCAACCG GATCGTCGGC AATGGCGAAT CCAACCAGCT CGAGGGGCGC
GGCGGCAGCG ACACGCTGAC CGGTGGCGGC GGATCGGACG TCTTCATCTT CGGCGCGGGA
TCGGGCAACG ACGTCGTCAA CGACTTCAAG CCGGGCAATG CCGCCGACGC CGACGTCATC
CGCCTTGCCG GCCTCACCGA TTTCAAGAGC TTCCAGACCG TCCTCGGCGC GATGACGCAG
CAGGGCAGCG ATGTCGTCCT GCGCCTGTCA GGCCAGGATG CGGTGACGAT CAGGAACGCT
ACGATCGGCG ACTTCACCGC TGACAATTTC CAGCTTCCGC TCGACCGGTC GGGCCTGACG
CCCAGCTTCG CCGACGAGTT CGACCGCTTC GACCTGTGGA GCAAGGACGG CGGCGGAACA
TGGAAGACCT GGTATGGCGG GGGCGCCTAT AAGAGCGGCC TCGACAACCG GACGCTGCGC
GGCAATGGCG AGGAGGAGAT CTACGTCGAT CCGCAGCTCA AGGGGACCGG CGCGACGGAG
CTCGGCCTCA ATCCCTTCCG GATCGCCGAC GGCGTGCTCA CCATCACCGC CAGCGACATG
CCCGCCGATG CAAAGGGCGC GCTGTGGAAC TATGACTATA TGTCGGGCGC GATCACCACG
CGCGACGTCT GGTCGCAGAC CTACGGCTAT TTCGAGGCGC GGCTGGAGCT GCCCGACGAG
AAGGGGGCGT GGCCGGCCTT CTGGCTGATG CCCACGGACG GCTCCTGGCC GCCCGAGATC
GACATCATGG AAGCCTATGG CACCGAGCAG ACGGTCCAGA CGCTCCACAC CAAGGAGACC
GGCGCGCATA CCCAGTCCTA CACCAAGACC TTCGTCGACG GTGGGACCTC GGGCATGCAC
AGCTACGGCC TGTTGTGGAC CGAGGATTCA CTGACCTGGT ATATCGACGG GACCGCCGTG
AAGACGGCGC CGACCCCGGA CGACATGCAC AAGCCCTTCT ACATGATCCT CAACCTGGCG
GTGACGTCGG GGACGACCGG ATCGCTGCTG GCCGACTACA AGATCGACTA TGTCCGCGCC
TATGCGCTGT CGGAGCTGCC CTCCGCGCCG GGGCAGGCGC CGGCCAGCGA CGACATGCTG
ACCGGCACCG CCGGGCATGA CGACATCCAG GGCGGGGCCG GCGCCGACAC CATCCATGGC
GGCGCGGGCA ACGACCATCT CTACGGCCAG TCGCCCTATG GCGGGCCGGA CGGCGCCGAT
CTCATCGATG GCGGCGACGG CAGCGACTAT CTCCAGGGCA ATGCCGGCAA CGACACGCTC
GACGGTGGCA ACGGATCGGA CCGGATCAAC GGCGGCGCCG ACGACGACTC GATCAGGGGC
GGCGAAGGCA ATGACAGCAT CAACGGCAAT CTCGGCAACG ACCATGTCGA TGGCGGGATC
GGCAATGACT ATCTGCGCGG CGGGCAGGGC AACGACACGC TGATCGGCGG CGACGGCAAC
GATATCCTGT CGGGCGATCT CGGCGCCGAC CTGCTGACCG GCGGGGCGGG GATCGACCGC
TTCGTCTTCG CGGGCAGCGG CTCGACCCTG GCCGCGCCCG ATCGCATCGC CGATTTCCAG
GATGGGGTCG ACCTGCTGTC GATCGGTTTC AGGCCCGCCG CGGTCATGAC CGGCGCGGCG
CAGGCCAGCC TGTCGGCGGC GGCGGCCGAG GCGCAGCATC TGTTCGACGC CCATCCCGGC
CTGGGCGAGG TGGCGGCGAT GCGGGTCGGC GCCGATACCT ATATCTTCTA TTCGGGCAGC
GGTGGCGCCA CCGTGGATTC GGCGATCAAC CTCGGCGCGG TCGATCCGGC CTGGATCGGC
AGCGCCGATT TCGTGGTGTG A
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| Protein sequence | MNYSGEIVGD ASSNTYSIGT VPKYIVELTG GGTDKVIAQT NYVLPDNVEN LEIWGGYAGV
GNALANRIVG NGESNQLEGR GGSDTLTGGG GSDVFIFGAG SGNDVVNDFK PGNAADADVI
RLAGLTDFKS FQTVLGAMTQ QGSDVVLRLS GQDAVTIRNA TIGDFTADNF QLPLDRSGLT
PSFADEFDRF DLWSKDGGGT WKTWYGGGAY KSGLDNRTLR GNGEEEIYVD PQLKGTGATE
LGLNPFRIAD GVLTITASDM PADAKGALWN YDYMSGAITT RDVWSQTYGY FEARLELPDE
KGAWPAFWLM PTDGSWPPEI DIMEAYGTEQ TVQTLHTKET GAHTQSYTKT FVDGGTSGMH
SYGLLWTEDS LTWYIDGTAV KTAPTPDDMH KPFYMILNLA VTSGTTGSLL ADYKIDYVRA
YALSELPSAP GQAPASDDML TGTAGHDDIQ GGAGADTIHG GAGNDHLYGQ SPYGGPDGAD
LIDGGDGSDY LQGNAGNDTL DGGNGSDRIN GGADDDSIRG GEGNDSINGN LGNDHVDGGI
GNDYLRGGQG NDTLIGGDGN DILSGDLGAD LLTGGAGIDR FVFAGSGSTL AAPDRIADFQ
DGVDLLSIGF RPAAVMTGAA QASLSAAAAE AQHLFDAHPG LGEVAAMRVG ADTYIFYSGS
GGATVDSAIN LGAVDPAWIG SADFVV
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