| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4535 |
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| Symbol | |
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| ID | 5198593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4987306 |
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| End bp | 4989588 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640584088 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001265011 |
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| Protein GI | 148557429 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase
[COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0741652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC GTATCGCCGA ACCGCCGCCG ACCGTCAGCA TCATCATGGC CTGCTTCAAC
GCGGCGCCCT GGCTGCGCGC TTCGGTGCGC TCGGCGCTCG ACCAGTCGCT GCGCGACATC
GAGCTGATCG TCGTCGACGA CGGATCGCAG GACGGATCGG TCGCGATCGG CCGCGAGCTC
GCGGCGGGCG ACCGGCGGGT CCAGTTCCAC CGCATGGCGC GCAACGGCGG CCCGGCGGCG
GCGCGCAACC ACGCGCTCGA CATGGCGTCC GGCCGCTTCG TCGCGATCCT CGACAGCGAC
GACCTGATGC ACCCCGACCG GCTGAAGCGC CTCGTCGCGG TCGCCGACGC GATCGAGTCC
GACATCGTCG CCGACGACCT GGTCGTCTTC GACGACGCCG ACGGGTCGCC GCCGGAGGGG
TTCTTTCGGG GCGCCAGGGC GCGGCGCGGC GAATGGATCA CCCTGGCCGA CTATTTCCGC
GAGACGCTGC TCTACGGCCG GATGCCCAAT CTCGGCTTCC TCAAGCCGCT GATCCGCCGC
GAGCTGATCG AAGGCAATGG CATCCGCTAT GACGAAGGGC TGCGCATCGC CGAGGACGAC
GCGCTGATCG TCCAGTTGCT GCGCGCCGGC GCCCGCTACC GGACGATCCC CGACGCGGGC
TATTTCTACC GCAAGCATGG CAGCTCGATC TCGCACCGGC TGTCGCGCGC CGATGTCGAG
ACGATGGTGA TGGCGGGCGA TCGGCTGGCG GCCGACCTGC GCGACGCCCC CGCCGACGTC
CGGCGCGCGC TCGCCCGGCG CAACCGCTCG ATCCGCGCCG CCCGCGACTT CACCCTGGCG
ATCGAGGCGA TCAAGGCGCG CCGCCCGGTC GCGGCGGCCG GGCTGATGCT CGGCCGCCCC
CGGTCGATCC CGCTGTTCCG CATGCCGATC GCGGCCCGGA TCGGCCGGCT GGCGGGGCGC
GGCCGCGACG AAGCCCCCGC CCCGCCCGCC CCCGCCGCAA CCGCGCCGAG GGTCTGCTTC
ATCAGCAACC AGCGGCTGAT CGGCGCCACC AACGGCAGCT CGGCCTATCT GATCGACCTC
GCCCGTGCGA CGCGCGCGGC GGGCCGCGAG CCGCACCTCG TCCAGCCCTC CCCCGCGATC
TTCGGCCGCC TGCCCTTCTT CCGGCTGCGG CCGGAAATGG CGGTGTTCGC CAGCCACCAT
GTCCGCGGCG CCTGGCGGGT CGGCGGCTGG CTCGTCGCCC GCGATCCGCA CGTCCACCTG
GGCGCCGCGA TCGGGATCGC GCGCCGGGTC GCCCGGCGGG TGGGAATCGC GGCGCGCTGG
ACGCTCGACC GGCCCGCCCC CTATGCGGTG GCCGCGCCCT GGACCAAGGC CGACCAGCTC
TTCGTCACCG GCCACGCCCG GCCGCGCGCC GACATCGTCG TCGCCGACTA TATGTTCCAG
TCGCGCGCCT TTCCCTTCGT CGCCCGGCCC GGCACGCCGA CCGCGATCGT GATGCACGAC
CTGTTCCACG CCCGCTCGGA GGGCTTCGCC GCGACCGGCG GCGGCGACAG CGTCGCCGCG
ATCGGCCGCG ACGCCGAGCT GGCGCTGCTC GGCCGGGGCG ACGCGGTGAT CGCGATCCAG
CAGGCGGAGG CCGCCTTCGT GCGGCGGGAA CTGCCCGACA GCGAGGTGAT CCTGGCGCCG
ATGGCGGCCG AGCCGGTCGC CGCGCCCCAG CCCGGCGAGA CCGACCGGCT GCTGTTCGTC
GGCAGCAACA CCGCGCCCAA CGTCCACGGC CTGCGCTGGT TCTTCGAGCG GGTATGGCCC
GCGATCCGCG CGGCGCGGCC GGCGGCGGTG CTCGACGTCG CGGGCTCGGT CGCTTCGTCC
TTCCCACAGG GCGGTCCCGC CGGAGTCCGC TTTCTCGGCC TTGTCGACGA CCTCGCGCCC
CTTTATGCGG GCGCCGGTGT CGTGATCTCG CCCCTGATCC AGGGGTCGGG CCTCAAGATC
AAGCTGATCG AGGCGCTGGC CCAGGGCAAG GCGACGGTCG CAACCGGTGT CACGCTGCAA
GGCGTCGAGG AGATTGCCAG CCAAGCCGTC GCGAAGGCCG ACGACCCGAT CCCGTTCGCC
GATGCCGTCA TCGGCCTGAT GCAGGCCGAA GCCGAGCGCG CGACGCTCGC GGCCAAGGCC
CTGGACACCG CGCGAGTCCA TTTTTCCGGC GACGCATGCT ATCGCGCCTA CCGGAACTGG
CTTGCGAAAA TCACCACCGG ACTCTCCCAA GTCAGCAACG AGGAGGCAAG AATATGCGCC
TGA
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| Protein sequence | MTNRIAEPPP TVSIIMACFN AAPWLRASVR SALDQSLRDI ELIVVDDGSQ DGSVAIGREL
AAGDRRVQFH RMARNGGPAA ARNHALDMAS GRFVAILDSD DLMHPDRLKR LVAVADAIES
DIVADDLVVF DDADGSPPEG FFRGARARRG EWITLADYFR ETLLYGRMPN LGFLKPLIRR
ELIEGNGIRY DEGLRIAEDD ALIVQLLRAG ARYRTIPDAG YFYRKHGSSI SHRLSRADVE
TMVMAGDRLA ADLRDAPADV RRALARRNRS IRAARDFTLA IEAIKARRPV AAAGLMLGRP
RSIPLFRMPI AARIGRLAGR GRDEAPAPPA PAATAPRVCF ISNQRLIGAT NGSSAYLIDL
ARATRAAGRE PHLVQPSPAI FGRLPFFRLR PEMAVFASHH VRGAWRVGGW LVARDPHVHL
GAAIGIARRV ARRVGIAARW TLDRPAPYAV AAPWTKADQL FVTGHARPRA DIVVADYMFQ
SRAFPFVARP GTPTAIVMHD LFHARSEGFA ATGGGDSVAA IGRDAELALL GRGDAVIAIQ
QAEAAFVRRE LPDSEVILAP MAAEPVAAPQ PGETDRLLFV GSNTAPNVHG LRWFFERVWP
AIRAARPAAV LDVAGSVASS FPQGGPAGVR FLGLVDDLAP LYAGAGVVIS PLIQGSGLKI
KLIEALAQGK ATVATGVTLQ GVEEIASQAV AKADDPIPFA DAVIGLMQAE AERATLAAKA
LDTARVHFSG DACYRAYRNW LAKITTGLSQ VSNEEARICA
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